KEGG   Hydra vulgaris (swiftwater hydra): 100204875
Entry
100204875         CDS       T01080                                 
Symbol
LOC100204875
Name
(RefSeq) WD repeat-containing protein 76 isoform X1
  KO
K24755  WD repeat-containing protein 76
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hmg04121]
    100204875 (LOC100204875)
   03036 Chromosome and associated proteins [BR:hmg03036]
    100204875 (LOC100204875)
   03400 DNA repair and recombination proteins [BR:hmg03400]
    100204875 (LOC100204875)
Ubiquitin system [BR:hmg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100204875 (LOC100204875)
Chromosome and associated proteins [BR:hmg03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100204875 (LOC100204875)
DNA repair and recombination proteins [BR:hmg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     100204875 (LOC100204875)
  DSBR (double strand breaks repair)
   Other DSBR factors
    Others
     100204875 (LOC100204875)
SSDB
Motif
Pfam: Beta-prop_THOC3 WDR55 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_RIG_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 Beta-prop_EML Beta-prop_NUP159_NUP214 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_RFWD3 DSE1_N EIF3I Beta-prop_VPS8 Beta-prop_LRRK2 MIOS_WD40 Beta-prop_NOL10_N Beta-prop_IFT140_1st Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_ACSF4 ANAPC4_WD40 WD_LRWD1 Beta-prop_Vps41 WD40_2 Beta-prop_WDR11_2nd WD40_like CFAP251_N Beta-prop_KIB1-4
Other DBs
NCBI-GeneID: 100204875
NCBI-ProteinID: XP_065679389
Position
06:complement(23240451..23294583)
AA seq 528 aa
MPKVRNVRTKAVRSCINGNPYQTKKPNNQHTDVISVKKESNGCLKADCDIKSDESDYEEF
DATQYKLSEYESTRIENIHRNKQILQSFNILEAKEQYNFTKPRTEKKKSFDVGLKRILNE
KIPLPRRVSLRIKNLPVSYTDLPPIEPSRQNTYYSPRRAPKLSMQAINISEDHGKSAMES
WSKLQNSKAELLSNNVKKFQEETLKLDIKYAAKVTKDRIYSIAIHPSCDKILACAGDKSG
NVGIWDVNSTQGKSTEVFLFSPHTQPINCLKFCPTDISKLYSCSFDGSVRVADFSSQQFS
EVFSIEENTDRFNYFDWPANKSNTLLVASSNGNVLLFDTRTSCIEQSYEIFQKSVRCVDF
HPQNEHLFAASSYDGKLATWDLRNLKKDNNKFLSMFQASKTTSTCFFSPGAGDKLLLTSQ
DDYLRVFNVDQVGKIDSPRWQVKHDNFTGRWLTTFRACWDPKTENCFVCGSMERPRQIDM
FGCMENGLLSHFSITSEEQTTVASVNAFHSSQNILVSGNASGKIYVWM
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgcctaaagtaagaaatgtcagaactaaagctgtaagatcttgcatcaatggaaatcct
tatcaaaccaaaaaaccaaataatcagcatacagatgtgataagtgttaagaaagaatca
aatggttgtttaaaagcagattgcgatataaaaagtgatgaatcagattacgaagaattt
gatgcaactcaatacaaactttctgaatatgaatcaacaagaatagaaaatattcatcga
aacaagcaaatattgcagagtttcaatattttagaggctaaagaacagtataattttaca
aaaccaagaacagaaaaaaaaaagtcatttgatgttggtcttaagaggatattaaatgaa
aaaatccctttacctcgcagagtgtcgcttcgtattaaaaacctacctgtttcttatact
gatttaccacccatcgaaccttccaggcaaaacacatattattctcctcgcagagctcca
aagctttctatgcaggctattaatatttcagaagatcatggtaaatcagcaatggaatct
tggtcaaaacttcagaattcaaaagcagaactattaagtaataatgttaaaaagtttcaa
gaggaaactctgaaattggacatcaagtatgcagctaaagtaacaaaagatcgtatttat
tcaattgcaatacacccttcatgtgataaaatcttagcatgtgctggcgacaaatcagga
aatgttgggatttgggacgtgaactcaactcaaggaaaaagtactgaagtttttttattt
tctcctcatacacaaccaatcaattgtttgaaattttgtcccacagatatttcaaaactt
tattcatgcagttttgatggtagtgttagagttgctgatttttcatcacaacagttttca
gaggtttttagcattgaagaaaacactgataggtttaattattttgattggccagcaaat
aagtcaaatacattattggttgcttcaagcaatggcaatgtgttactttttgatacacga
acaagttgtattgaacagagttatgaaatctttcagaagagtgtacgctgtgttgacttc
cacccccaaaatgagcatttgtttgctgcttcttcttatgatggaaaacttgctacatgg
gatttacgtaatctcaaaaaagataacaacaaatttctttcaatgttccaagcttctaaa
acaacttctacatgttttttttctccgggagctggagataaattattacttacatcacaa
gacgattaccttagagtttttaatgttgatcaagttggcaaaatagattctccaagatgg
caagtaaaacacgataactttactgggaggtggcttacaacatttcgagcatgttgggat
ccaaaaactgaaaactgttttgtttgtggaagtatggaaaggccaagacagattgatatg
tttggatgtatggaaaatggattattatctcacttttcaataaccagtgaagagcaaacc
acagtggcatcagtaaatgcttttcattcatctcaaaatattcttgtatctggtaatgca
agtgggaaaatctatgtatggatgtaa

  All links  
Gene (47)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (41)   
   Pfam (41)   
All databases (94)   

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