KEGG   Hymenobacter nivis: DDQ68_14420
Entry
DDQ68_14420       CDS       T05498                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
hnv  Hymenobacter nivis
Pathway
hnv00521  Streptomycin biosynthesis
hnv00523  Polyketide sugar unit biosynthesis
hnv00525  Acarbose and validamycin biosynthesis
hnv00541  Biosynthesis of various nucleotide sugars
hnv01100  Metabolic pathways
hnv01110  Biosynthesis of secondary metabolites
hnv01250  Biosynthesis of nucleotide sugars
Module
hnv_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
hnv_M01025  dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:hnv00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    DDQ68_14420 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    DDQ68_14420 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    DDQ68_14420 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    DDQ68_14420 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    DDQ68_14420 (rfbB)
Enzymes [BR:hnv01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     DDQ68_14420 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short NAD_binding_10 NmrA
Other DBs
NCBI-ProteinID: AWM33879
UniProt: A0A2Z3GIF8
Position
3257034..3258089
AA seq 351 aa
MKILITGGAGFIGSHVVRLFVMKYPNYQIINLDALTYAGNLENLRDVEGAPNYRFVKGDI
ADQAFIDELFAREEPDAVIHLAAESHVDRSITDPMAFVKTNVIGTVNLLNAARNLWQPGG
YAGHTFYHVSTDEVYGSLDFGPEMFTEDTAYDPRSPYSASKASSDHFVRAWHHTYGLPIK
LSNCSNNYGPNHFPEKLIPLAIHRLRTGQPVPVYGKGENVRDWLFVKDHATAIDAVFHNG
KLGDTYNIGGVNEWQNLKLIELLCDVVDEKTGQGPGTSRRLIKFVTDRAGHDMRYAIDSS
KIMNELGWKPSVTFEQGLAQTVDWYLANEEWLNSVTSGAYQDYNTKQYAGR
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgaaaatcctcatcaccggcggggccggcttcattggttcgcacgtggtgcggctgttt
gttatgaagtaccccaattatcagattattaacctggatgcactgacgtacgccggcaac
ctggagaacctgcgcgacgtggaaggggcccccaactaccgcttcgtgaagggcgacatc
gccgaccaggcgttcatcgacgagctgtttgcccgcgaggagcccgacgctgtaattcac
ctggccgccgaaagccacgtcgaccgcagcatcaccgacccgatggcgttcgtgaaaacc
aacgtcatcggcaccgtgaatttgctgaacgcggcgcgtaacctgtggcagccgggcggc
tacgccggccacaccttctaccacgtgagcaccgacgaggtgtacggctcgctggacttc
ggccccgagatgtttacggaggacaccgcctacgacccccgctcgccgtactcagcctcc
aaggccagttccgaccactttgtacgcgcctggcaccacacctacggcctgcctatcaag
ctcagcaactgctcgaacaactacggccccaaccacttccccgagaagctgattccgctg
gccatccaccgcctgcgcaccggccagccagtgccggtgtacggcaagggtgaaaacgtg
cgcgactggctcttcgtgaaagaccacgctacggccatcgacgcggtgtttcacaacggc
aagctgggcgatacttacaacatcggcggcgtgaacgagtggcagaacctgaagctcatc
gagctgctctgcgacgtggtggacgagaaaaccggccagggccccggcacctcgcgccgg
ctcatcaagttcgtcaccgaccgcgcgggccacgacatgcgctacgccatcgacagcagc
aagatcatgaacgagctgggctggaagccgtccgtcaccttcgagcagggcctggcccag
actgtggactggtacctcgccaacgaggagtggctgaacagcgtgaccagcggtgcctac
caggattacaacaccaagcagtacgcggggcggtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (12)   

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