KEGG T06595: E5Q53

Pseudohaemophilus parahaemolyticus: E5Q53_05960

Entry

E5Q53_05960       CDS       T06595

Symbol

rsmB

Name

(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

hpaa Pseudohaemophilus parahaemolyticus

Brite

KEGG Orthology (KO) [BR:hpaa00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hpaa03009]
    E5Q53_05960 (rsmB)
Enzymes [BR:hpaa01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     E5Q53_05960 (rsmB)
Ribosome biogenesis [BR:hpaa03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    E5Q53_05960 (rsmB)

SSDB

Motif

Pfam:

Methyltr_RsmB-F NusB RsmF-B_ferredox FtsJ Methyltransf_31 Methyltransf_25 Methyltransf_5 TRM5-TYW2_MTfase TrkA_N Methyltransf_15

Other DBs

NCBI-ProteinID:

QEN11810

Position

1240388..1241686

AA seq 432 aa
MKKKSPRAVAAQIILEVLDQGKSLSTLIPEAHHQLEPKDLPLVQEVTFGICRVLPRLESI
IKQLVEKPLKGKIRLVHCLLLVGLYQLLYMRVPAHAAVDEVVNATKTLKLDSFRALTNGV
LRRFLREQEQILAVVDKHWQTLHPEWFVNKIKKAYPHWREIVEANNQRPPMWVRANVQHI
QPKDYVALLGELANQRENPPACVPDCAILLENPVSVNQLPHFEQGWATVQDAHAQWSAEL
LDAQNGETILDACAAPGGKTTHILEKAPQAVVFALDIEENRLKRVRENLMRLNQAATVIC
GDASQPDTWLEKGVMFDRILLDAPCSATGVIRRHPDIKWLRKEADITELANLQAKILEAL
WARLKPNGILLYATCSILPEENSLQIQRFLENHSDAEAVEMDFHGEKVTEKQFFPQPNGG
DGFFYAKLKKAG

NT seq 1299 nt +upstreamnt +downstreamnt
atgaaaaaaaaatcccctcgtgcggttgccgcacaaattattttagaggtgttggatcag
ggcaaatcgctttctaccctcatccctgaagctcaccatcagcttgagccaaaagattta
ccgttggtgcaagaggtgacgtttggcatctgtcgtgtgttgcctcgtttggaaagcatc
atcaagcagttagtggaaaaaccgctcaagggtaaaatccgcttggtgcattgcttgctg
ttggttgggttgtatcaactgctttatatgcgtgtgccagctcacgcggcagtggatgaa
gtggtgaatgcgactaaaacgctgaaactcgacagcttccgtgctctaactaacggcgtg
ttgcgtcgtttcctgcgtgagcaagagcaaattctcgctgtagtcgataaacattggcaa
acgcttcaccctgaatggtttgtgaataaaatcaaaaaagcctatccgcattggcgtgag
attgtagaggcgaataatcagcgtccaccgatgtgggttcgtgccaacgtgcagcatatt
cagccgaaagattatgtggctttattgggcgagttagcaaatcaacgtgaaaatccgccc
gcttgcgtgcctgattgtgctattttacttgagaatccagtgtcggtaaaccaattgcct
cacttcgaacaaggctgggcgacggtgcaagatgctcacgctcaatggtcagctgagttg
ctcgacgctcaaaatggtgaaacgattttagatgcctgtgccgcgcctggtggcaaaacc
acacatattcttgaaaaagccccgcaagcggtcgtttttgcgttagatattgaagaaaat
cgcttgaaacgtgtgcgggagaatttaatgcgtctcaaccaagctgcgacggtgatttgt
ggcgatgccagccagcctgatacgtggcttgaaaagggcgtaatgttcgaccgcattctg
cttgatgcaccttgttcggcaacgggggtgattcgtcgtcatcctgatattaaatggctt
cgcaaagaagcggacattactgaacttgccaacttgcaagctaagattttagaggcactt
tgggcaagattaaaaccaaacggcattttgctttatgcgacttgctcgattttgccagaa
gagaacagcttgcaaattcaacgtttccttgaaaatcactcggatgctgaagcggtggag
atggattttcacggtgaaaaagtgaccgaaaaacaattcttccctcagcccaacggcggg
gatggattcttttatgcgaagttaaaaaaagcgggttga

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (10)   
   Pfam (10)   
All databases (11)   

Download RDF

DBGET integrated database retrieval system