KEGG   Helicobacter pylori PeCan4: HPPC_05610
Entry
HPPC_05610        CDS       T01322                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hpc  Helicobacter pylori PeCan4
Pathway
hpc02024  Quorum sensing
hpc03060  Protein export
hpc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hpc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HPPC_05610
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPPC_05610
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HPPC_05610
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpc02044]
    HPPC_05610
Enzymes [BR:hpc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HPPC_05610
Secretion system [BR:hpc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HPPC_05610
  Eukaryotic Sec-SRP protein
   HPPC_05610
SSDB
Motif
Pfam: SRP54 SRP_SPB CbiA SRP54_N AAA_31 Zeta_toxin AAA_30 AAA_22 AAA_24 AAA_17 DUF2075 AAA 6PF2K cobW APS_kinase ArsA_ATPase AAA_16 ResIII AAA_14 Fer4_NifH DO-GTPase1 ABC_tran AAA_33 NTPase_1 AAA_11 T2SSE Thymidylate_kin KTI12 AAA_19 ParA AAA_18 NACHT KdpD MraZ MobB ATP_bind_1 YqeC
Other DBs
NCBI-ProteinID: ADO07332
UniProt: E1Q384
Position
complement(1137490..1138836)
AA seq 448 aa
MFQALSDGFKNALNKIRFQDDEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKLN
GIGKQQFLDALEKSLLEILSAKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKT
KNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFHEENKSVKEIANNALKRAKEAQFDVLL
VDSAGRLAIDKELMQELKEVKEVLNPHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLS
KFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIVGRLMGAGDIISLAEKTA
SVLNPNEAKDLSKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMASALKDTDL
ESSLEVKKIKAMVNSMTKKEQENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMA
KRLTNKKGISDLMNLMSQAKNQTPPKMR
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtttcaagcgttaagcgatgggtttaaaaacgcgctcaataaaatccgctttcaagat
gatgaaaaagcgctagacagagcgttagatgaattgaaaaaaacgcttttaaaaaatgat
gtgcatcataaagtggctagagaattgcttaaaaaagtggaaagccagactaaactcaat
ggcattggcaagcagcaatttttagacgctttagaaaagagtttgttagaaattttaagc
gctaaagggagcagtggtttcactttcgctcaaacgccccccaccgtggttttaatggcc
ggtttgcaagggagcggtaagacaaccaccaccgctaaactcgctcattatttaaaaacc
aaaaataaaaaagtgcttttatgcgcatgcgatttgcaacgcttagcggcggtggagcaa
ttaaaggttttgggcgaacaggtgggcgtggaagtgtttcatgaagaaaataaaagcgtg
aaagaaatcgccaacaacgctttaaaaagggctaaagaagcgcaatttgatgttttactt
gtggatagcgcggggcgtttagccattgataaagagcttatgcaagaattaaaagaagtc
aaagaagtcttaaacccccatgaagtgctgtatgttgcagacgcgttgagcgggcaagat
ggggtcaaaagcgcgaacacctttaatgaagaaataggcgtgagcggggtggtgttaagc
aaatttgatagcgattctaaagggggtatcgctttaggcatcacttaccaattaggctta
cccttgcgttttattgggagcggggaaaaaatccctgatttagatgtgtttgtgcctgaa
aggattgtggggcgtttgatgggggctggagatattatctcgctcgctgaaaaaaccgct
agcgttttaaaccctaatgaagccaaagatttaagcaaaaagctcaaaaaagggcaattc
actttcaatgactttttaaaccagattgaaaaagtgaaaaaattaggctctatgagttct
ctaatctctatgattccaggtttagggaatatggcaagcgcgctaaaagacacggattta
gaaagctctttagaagtgaaaaaaatcaaggctatggtcaattccatgaccaaaaaagag
caagaaaaccccgagattttaaacggcagccgaagaaaaaggatcgctttagggagcggc
ttagaagtgtctgaaatcaaccgcattatcaaacgctttgatcaggcgagcaaaatggcg
aaacgcttaacgaataaaaagggtattagcgatttgatgaatttaatgagtcaggctaaa
aatcaaacgccccctaaaatgcgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (37)   
   Pfam (37)   
All databases (49)   

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