KEGG   Halomonas qaidamensis: K1Y77_10250
Entry
K1Y77_10250       CDS       T08648                                 
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
hqd  Halomonas qaidamensis
Brite
KEGG Orthology (KO) [BR:hqd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hqd03019]
    K1Y77_10250 (rapZ)
Messenger RNA biogenesis [BR:hqd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     K1Y77_10250 (rapZ)
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_18 SKI mTERF AAA_22 AAA_21 AAA_16 AAA_23 NACHT AAA_29 CoaE
Other DBs
NCBI-ProteinID: UYV17877
Position
2206660..2207574
AA seq 304 aa
MQLVIISGRSGSGKSIALQALEDLGYYAIDNLPAMLLGSLVDELREQGERTQLAVSIDAR
NLPAALQQLPTMLEALRQKSIHFQVIYLTTDARILLERYSATRRRHPLTRDSDMTLEEAI
DKEEETLLDIRDLADLMIDTSRLSVHDLRRRITDQVAQQREDRLTLTFESFGYKRGVPLD
ADLVFDVRCLPNPYWDPTLRQYTGRDAKIVTFLSGYSIVEEMSNDIQVWLEKWLPAYQNS
QRSYMTIAIGCTGGQHRSVYMVEDLAQKLVRHTGEVQLRHRELGLQYTLSETLPFASTSS
TSET
NT seq 915 nt   +upstreamnt  +downstreamnt
atgcaactggtgatcattagcggccgttcagggtccggtaaatctatcgccttacaagcg
ttagaagatcttggctattacgccatcgataacttacctgccatgctacttggctcccta
gtagatgaactgcgtgagcaaggagagcgcactcagctagcggtcagcattgatgctcgc
aatctaccagcagctttacagcaattgccgacaatgctcgaggctttacgccagaaaagc
attcactttcaagttatctatctcactacggatgctcgcatacttcttgaacgctattct
gctacgcggcggcgacacccgctaacccgggatagtgatatgacgttagaagaagcaatt
gataaagaagaagaaaccctgctcgacattcgagatctcgcagacctaatgatcgacacc
tctcgcttatcggttcacgatttgcgacgccgaataacagatcaggttgcccagcagcga
gaagatagacttacccttacgtttgaatcgtttggctacaaacgcggcgtgccgctcgat
gcagatttagtctttgacgtgcgctgtctaccaaacccctactgggatcctacgttacgc
caatatactgggcgcgatgctaaaatcgttactttcctaagtggttattccatagtggaa
gagatgagtaatgatattcaggtatggttggaaaagtggttgcctgcctatcaaaatagc
cagcgtagctatatgacgattgccattggctgcaccggtgggcagcaccgctctgtttac
atggtagaagacttagcgcaaaagctggttaggcacacaggcgaggttcaactccgccat
cgtgaactagggttgcagtacaccctaagtgaaacgttgccttttgcatccacatcttca
accagcgaaacataa

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