KEGG   Herbaspirillum rubrisubalbicans: Hrubri_4548
Entry
Hrubri_4548       CDS       T04238                                 
Name
(GenBank) RND family efflux transporter MFP subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
hrb  Herbaspirillum rubrisubalbicans
Pathway
hrb01501  beta-Lactam resistance
hrb01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Hrubri_4548
   01503 Cationic antimicrobial peptide (CAMP) resistance
    Hrubri_4548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hrb03036]
    Hrubri_4548
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hrb02000]
    Hrubri_4548
   01504 Antimicrobial resistance genes [BR:hrb01504]
    Hrubri_4548
Chromosome and associated proteins [BR:hrb03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    Hrubri_4548
Transporters [BR:hrb02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   Hrubri_4548
Antimicrobial resistance genes [BR:hrb01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    Hrubri_4548
SSDB
Motif
Pfam: HlyD_3 HlyD_D23 Biotin_lipoyl_2 CusB_dom_1 DUF1344
Other DBs
NCBI-ProteinID: ALU91693
Position
complement(5352915..5354207)
AA seq 430 aa
MPHIASTPRHAGRRSSTAVRLALSLTMVAVLGACSRSGDQPKSAAQSEVGYVVVKAQRQA
LTTELPGRTTAYLAADIRPQVGGIIQQRLFKEGSLVKAGQPLYQIDPASYQAAYDSAKAS
LLKSEATLASSKLKAERYAELNKIDAVAKQDNDDTQSTMRQNQADVEVQKAAVQTAAINL
QYTRIVSPISGRIEQSTVTPGALVTASQTTALTTVQQIDPIYVDVTQSTVDLLRLRRELA
SGQIRKSGANAAQVKILLEDGSTYDHPGKLEFTGLSVDTGTGMITLRAVVPNPDGVLLPG
AYVRAVLEEGVDEHALLVPQKAISRDQTGAATALVVGTDGKVQQRVVTVARAVGNNWWIS
KGLQEGDKLIVDGLQKVRVGDSPRAIDVTDSLQKDLAREAAAAAADPSLGGDAGKAAAAG
TAATSGAQSK
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgccccacattgcaagcactccgcgccacgcagggcgccgttcctccaccgcagtgcgc
ctggcgctgtccctgacgatggttgccgtcctgggcgcctgctccaggtcgggcgaccaa
cccaagtcggcggcccagtccgaagtcggctatgtggtcgtcaaggcgcagcgccaggcg
ttgaccaccgagttgcccggccgcaccaccgcctacctggcggccgacatccgtccccag
gtgggcggcatcatccagcagcgcctgttcaaggaaggtagcctggtcaaggccggccag
ccgctgtatcagatcgatccggccagctaccaggctgcctatgacagcgccaaggcatcg
ttgctcaagtccgaggccaccctggcttcatccaagctgaaggccgagcgctatgcggaa
ttgaacaagatcgatgccgtcgccaagcaggacaacgacgatacccaaagtaccatgcgc
cagaaccaggccgatgtagaagtgcagaaggccgctgtgcagaccgccgccatcaacctg
caatacaccaggattgtctcgcccatctcgggccgtatcgagcaatccacggtcacgccc
ggcgcgctggtgacggccagccagaccacggccttgaccacggtacaacagatcgatccg
atctacgtggacgtcacccagtccaccgtggacctgctgcgcctgcgccgagaactggcc
agtggccagatcaggaagagcggtgccaacgcggcccaggtcaagattctgctggaagac
ggctccacctatgaccaccccggcaagctggaattcactggcctgtcggtcgataccggc
accggcatgatcacgctgcgcgccgtggttcccaacccggatggcgtgctactaccgggt
gcctatgtgcgtgcggtgctggaggagggcgtggacgaacacgccctgctggtgccgcag
aaggccatcagccgcgaccagaccggtgctgccactgccctggtggtgggcacggacggc
aaggtgcagcagcgcgtggtgaccgtggcgcgtgccgtgggtaacaactggtggatcagc
aagggcttgcaggaaggtgacaagctcatcgtcgatggattgcagaaggtgcgcgtcggc
gatagcccgcgtgccatcgacgtcaccgacagtctgcagaaggacctggcgcgcgaagcg
gccgctgctgccgccgacccctcgctgggcggtgacgccggcaaggctgccgctgcggga
accgctgctacttccggtgcccagtcgaagtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (7)   

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