KEGG   Haliotis rubra (blacklip abalone): 124272986
Entry
124272986         CDS       T07967                                 
Name
(RefSeq) transcription elongation factor SPT4-like
  KO
K15171  transcription elongation factor SPT4
Organism
hrj  Haliotis rubra (blacklip abalone)
Pathway
hrj03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    124272986
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hrj03021]
    124272986
   03019 Messenger RNA biogenesis [BR:hrj03019]
    124272986
Transcription machinery [BR:hrj03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     124272986
  RNA polymerase I system
     124272986
Messenger RNA biogenesis [BR:hrj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     124272986
SSDB
Motif
Pfam: Spt4 HVO_0758
Other DBs
NCBI-GeneID: 124272986
NCBI-ProteinID: XP_046564180
Position
Unknown
AA seq 116 aa
MSLETVPKDIRNLRACLLCALVKTLDQFAYDGCDNCEEYLHMKNNRDAVYECTSSNFDGL
IAMMSPEDSWVSKWQRIARFAKGCYAVSVTGKLPPGIVRELRGKGIMYRPRDVSQS
NT seq 351 nt   +upstreamnt  +downstreamnt
atgtctttagaaactgttcctaaagacatcagaaacctgagggcctgtttactgtgtgct
ctggtgaagactctggaccagtttgcgtatgatggatgcgacaactgcgaggaatatctc
cacatgaaaaacaacagggatgctgtgtacgagtgcaccagctccaactttgatgggttg
atagccatgatgagccctgaagacagctgggtgtcaaagtggcagagaatcgcccggttt
gccaaaggttgctatgcagtgtctgtgacggggaagctgcccccaggtattgtgagggaa
ctccggggcaaggggatcatgtaccgccccagggacgtcagccagtcatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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