KEGG   Haliotis rubra (blacklip abalone): 124291133
Entry
124291133         CDS       T07967                                 
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
hrj  Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hrj03041]
    124291133
Spliceosome [BR:hrj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    124291133
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    124291133
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 124291133
NCBI-ProteinID: XP_046583999
Position
Unknown
AA seq 1830 aa
MPKRRDVSEKDNSSDEEPKKIKSAGSATEDSSSDSDSDSDSNSSSSNSDEESNSDSSSAG
VNTSKRRDVRADSPERKRSQRSSDDSHADNSSRRSTGSRDHQNRSNRNTSERSVSSRSPD
PSRRQKTVSRSPAASQERLSDRSSSDRRSDRPSSDRRGDRPSSDRRPERPSSDRRPERSS
SDRRPERPSSDRRPDRPSSDHRSERPSSDRRLDKTLLDRRLERDRQGSRVEKSPSPVSDR
HQRTNKSERTRSPSSDGQKRDLSPSQSRERMVEKSKMRDKSESPRSRRKQSSGSPKQRKS
PSSKSPQRSSRSEQKPDRRRHDSSSDDRPSPRAAGEQKCKSTKSNDTSERVRDSQSHKKR
HHSSSSEEEKRPSEGKKRPEEKGKRVKRLREDSKGEKSKESSDSSSSSSDDSDSSSSDES
EKDSSPRKTRPHESDRESGEVRTTDEDSDVGKSGKKSKMSVQKTDGNEKDEERVTLVQLE
DDNDDEFEREEEAQRREEEERRDKERREREKAAAKERKEKEKKDLLARERKEQDAREGKK
KEGRDQQKGKEHEEEETRKRKQRDEDSDEGSLASREKDPRSEKKRSKDDDDRSQSKSEKS
LDNRNDSTEQERRGERNRDRSRSIERERAEKVKSDRHGSREKERREIKTIAARSRSIEKE
ARAERKRSDKDLERQVEKTRGSPERERKSEKSTDSKSSSKERERKEKRGGDRSDSNEMEN
REKRRGDRSGSSEIERRDEKRRGDKSGSSEIERRDEKRRGDRSGSSEIDRKEEKRRLDRS
GSSEIERREEKRRGDRSQSREIEKRVEKGRVEKESDGSRAHQGRADRGGEREKRQEGERE
REKEEEMSDSSDDSSDSSSSDSSDSDESEEEMPKRRSEIAVRVVNRANSREKDRRKEQWN
SESEDEDRQSERRDKHRRREDRSELKEGLTEERTGIRRGGSRENDRRNERNYERGERDGS
VDRDRRDQRGGKMRRDERDDRRDGRWNDRRDDRGRRNEERDERQMDRWRGDGEVDRWRRN
DRDGDRWNDDRGDRRGMNDRRVDRRDRNGEDTENDSNSRKRRVGEADPAAAGGGEGEPVA
KVAKAAPTGKQMLTGKTGGAYIPPAKLRMMQAQITDKSSVEYQRISWEALKKSINGLINK
VNVSNIILIVKELFQENIVRGRGHLARSVIQAQTLSPTFTHVYAALVAIINTKFPQNGEL
ILRRLILQFKKGFRRNDKTVCLSSTRFIAHLVNQQVAHEVIALEILTLLMENPTDDSVEV
AIGFLKECGQKLTEVSPRGITAIFERLRNILHEGMIDTRVQYMVEVMFAIRKDGFKDHVA
VVDDLDLVEEVDQFTHLITLEDAVQSEDLLNVFRADPDYLENEDKYKSLKREILEECSSD
EGESGSGSSSEEDSDEDEEDEEAKQIIIDNTETNLVALRRTIYLTIQSSLDFEECAHKLL
RMEMKPGQEVELCNMILDCCAQLRTYEKFFGLLAQRFCQLDKKYVEPFQTTFIEQYETIH
RLETNKLRNVAKFFGHLLYSDAISWGVLVCVKLNEEDTTSASRIFIKILFQELSEYMGLP
KLNDRLKDPTLQEYFEGIMPRDNPKNTRFAINFFTTIGLGGLTDDLRDHLKTMTKQLMQQ
QQQQQQQESESSSDSSDSDSSDSDSSSSSNSSDSDSDSSSSDSGSETETRKKKKSKPAAK
TKHSSKEENSDQDSRRHRREYANGDYSHHSNRENKKKKRRNEQEEEDMDYEKPRREDSEL
TITDKCVMTKCTLIPGIDGLVIIECQTLDVRLKTDAIEIENLSIEIIGWTISLTKGQTVE
IIKNLGHLLMKCAETDRMTDALMDRGMGSS
NT seq 5493 nt   +upstreamnt  +downstreamnt
atgccgaaaagacgggatgtttcagaaaaggacaattcctcagatgaggaacctaagaaa
atcaaatctgctggatctgcaacagaagatagttcttctgactctgactcagactctgat
tccaacagtagctcctccaactctgatgaagaatccaactcagactcaagctctgctggg
gtaaacacctctaaaaggagagatgtgagagcagacagtcctgaaaggaagaggtcccaa
aggagttctgatgacagccatgcagacaatagctctagaaggtctacaggctcgcgtgat
caccagaacagatcaaacagaaatacgagtgagagatctgttagtagcagaagtccagat
ccaagcagaagacaaaaaactgtctctagaagtccagctgcttcacaggaaagactctca
gacaggtcatcctcagatcgcagatctgacagaccatcctcagatcgtagaggggacaga
ccatcctctgatcgtagacctgaacgaccttcttcagatcgcagacctgaacgatcttcc
tcagatcgccgacctgaacgaccatcttcagatcgaaggcctgacagaccgtcctcagac
cacagatctgaaaggccatcttcagatcgcagactcgacaaaacattattagaccgcaga
ctggaaagagatagacaggggtcaagagtagagaaatcgccaagtccagtctctgatcga
catcaaaggacaaataaaagtgaaaggaccagaagtccaagttcagatggacaaaagagg
gacctttcaccaagtcagtcaagggagagaatggttgaaaagtcaaagatgagagataag
tcagagagtccaaggagtaggcgtaaacagagcagtggttcaccaaaacagaggaaatct
ccttcaagcaaatcccctcagaggtcatcacgatcagagcagaagcccgatcgtagaaga
catgatagttccagtgatgacagacccagtccaagagcagcaggtgaacagaagtgtaaa
tccacaaagtcaaatgacacttctgaaagagtgagggattcccagtctcacaagaagcgg
catcacagtagctctagtgaggaggagaaacgtccaagtgaaggaaaaaagcgtcctgaa
gaaaaaggaaaacgagtgaagagattgagggaggacagtaaaggggaaaagagtaaggag
tcatctgactcatcttcatcttcctctgatgactctgattccagtagcagtgatgagtct
gagaaggatagctctcctcgcaagactcgacctcacgagagtgacagagagagtggtgaa
gtacgcacaacagatgaagacagtgatgtagggaagagtggaaagaagtccaagatgtct
gtacagaaaactgatggtaatgaaaaggacgaggagagagtaaccttggtgcagctggag
gatgataatgatgatgagtttgagagggaggaagaagctcaacgccgagaggaagaggag
agaagagacaaggagagacgagagagggaaaaggctgcagccaaagaaaggaaggagaaa
gagaagaaggatctcttggcaagggagaggaaggaacaggatgctcgggaggggaagaaa
aaggaaggaagagatcagcagaaggggaaagaacatgaagaggaagaaacccggaaacgc
aaacaaagagatgaagacagtgatgaagggtctcttgccagtcgtgagaaggatccaagg
tcagagaagaagaggagcaaggatgatgatgacaggagtcagagtaagagtgagaagagt
ttggataacaggaatgacagtacagagcaagaaagacgaggggagaggaatcgtgatagg
agtaggagtattgagagagaaagagcggagaaggtgaagagcgacagacatggaagcaga
gagaaggaaaggagagaaataaagaccatagctgcaagaagcagaagtattgaaaaagag
gcaagggcagagagaaagagaagtgacaaagatttagaaagacaagttgagaaaactaga
ggaagccctgaaagagaaagaaaatctgaaaagtctacagatagtaagagcagcagtaaa
gagcgggaaagaaaagagaaaaggggaggtgatagaagtgatagcaatgaaatggaaaat
agggagaagagaagaggtgatagaagtggaagcagtgagatcgaaagaagagatgagaaa
aggagaggtgataaaagtggaagcagtgagatagaaagaagagatgaaaaaagaagaggt
gatagaagcggaagcagtgagatcgacagaaaagaggagaaaagaagacttgatagaagt
ggaagtagtgagattgagagaagagaggagaaaagaagaggtgataggagccagagccgt
gaaatagaaaaaagagtagagaaaggaagggttgaaaaggagtctgatggtagcagagcc
catcaaggcagggcagacaggggaggggagagagagaaaagacaagagggagagagggaa
cgagagaaagaggaagaaatgagtgacagctcagatgacagttccgatagttctagcagt
gacagcagcgacagtgatgaaagtgaggaagaaatgccaaagagaaggagtgaaattgcc
gtcagggttgttaacagggccaacagtagagaaaaggatagaaggaaagaacagtggaac
agtgaatctgaggatgaagacagacaatccgagaggagagacaaacatcggaggagagag
gaccgaagtgagctgaaagaaggcctgacagaagagagaacggggataagacgtggtggt
agtcgtgagaatgacagaaggaatgagaggaattatgaaaggggagagagagatggtagt
gtagacagggataggagagatcaaagaggtgggaaaatgaggagagatgaaagagatgac
aggcgagatggcaggtggaatgacagaagagatgaccgtggcaggaggaatgaagaaagg
gatgaacgacagatggacagatggaggggtgatggagaggtggatcgttggagaaggaac
gaccgtgatggggatcgatggaatgatgacagaggcgacagacgagggatgaatgacaga
agagtggataggagggatagaaatggggaggatacagaaaacgatagcaactctcgcaag
agaagagttggggaagcagatcctgcagctgctggcggtggtgaaggggagcctgtcgct
aaggtggccaaggctgcacctacaggcaagcaaatgttgacagggaaaacaggcggtgcc
tacatcccacctgccaaactacgcatgatgcaagcacagataaccgacaagagcagtgtg
gagtaccagcgtatatcttgggaggctctgaagaagagcatcaacggtctcatcaacaaa
gtgaacgtctcaaacatcatcttgattgtcaaggagctgttccaggagaatattgtcaga
ggaagaggtcacctggccagatcggtcattcaagcacagaccctgtcaccaaccttcacc
catgtctacgctgctctagtcgccatcatcaacactaaatttcctcaaaatggtgagctg
attctgaggcgtctgattctgcagttcaagaagggtttccggagaaatgacaagactgtg
tgtttgtcttctacgcgtttcatagctcacctggtcaaccagcaagtggcccatgaagtg
atcgccctggagatcctcaccctgctgatggagaaccctacagatgactccgtggaagtg
gctattggcttcctcaaggagtgtggacagaagctgactgaggtctctccccgaggaata
actgcaatatttgagcgcctgcgtaacattttgcatgaaggcatgattgacactcgggtc
cagtacatggtggaggtgatgtttgctatccggaaagacggcttcaaggatcatgttgcc
gttgttgatgaccttgaccttgtggaagaggtggatcagttcacacatctcatcaccctg
gaagatgctgtgcagtcagaggacctcctgaatgtgtttcgagctgatccagactatttg
gaaaatgaagacaagtacaagtctctcaagagagagattctagaagagtgcagctctgat
gaaggggagagcggatcggggtccagcagcgaggaagacagtgatgaagatgaggaagat
gaggaagccaaacagataatcattgacaacactgagaccaacctggtggccttgcgccgg
acaatctacctgaccatccagtcaagtctggactttgaggagtgtgcccacaagctgctc
cgtatggagatgaagccaggacaagaagtggaactgtgcaacatgattctcgattgctgc
gcccagctgagaacatatgaaaagttctttggtctgctagcacagcgtttctgtcaactg
gacaagaagtacgtggagccattccagaccactttcatagaacagtatgagaccattcac
agactggagacaaacaaactgaggaacgttgctaaattcttcggtcatcttctctacagt
gatgccatcagctggggggtgttggtgtgtgtgaagctgaatgaggaggacacgacatca
gccagtaggatcttcatcaagatcttgttccaggaattatccgaatacatgggtttgcca
aagctcaatgatcgtctcaaagacccaacacttcaagaatattttgaaggaatcatgccg
cgggataatcccaagaatacgcgttttgctataaacttttttacaacaatcggtcttgga
ggactaacggatgatcttcgtgaccacctgaagacaatgaccaaacagctgatgcagcag
caacaacagcaacagcagcaggaatctgagtcttcatcggactcatcagatagtgacagc
tccgatagtgacagctcctcctccagcaacagctctgactcagactctgacagcagctca
tcagactcaggctcagagacagagacaaggaagaagaagaaaagcaagccagcagccaag
accaagcacagcagcaaagaggaaaactccgaccaggacagcagaagacacagacgagaa
tatgccaacggagactacagtcatcacagcaatagagagaacaagaagaagaagagaaga
aatgaacaggaggaagaagacatggactacgaaaaaccgagaagggaagactccgaactg
acaattaccgacaagtgcgtgatgacgaaatgtacactgattcctgggatagacggactc
gtgataatcgagtgtcagacactagacgtgagactgaaaacagacgcgatagaaatcgag
aacctatcgatcgaaatcatcggctggacaatcagtttgacgaaaggacagaccgtagaa
ataataaaaaacttaggtcacctgttaatgaaatgcgccgagacagacagaatgacggac
gctttgatggacagggggatgggctcaagttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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