KEGG   Halobaculum rubrum: K6T25_04505
Entry
K6T25_04505       CDS       T07963                                 
Name
(GenBank) deoxyribonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
hrm  Halobaculum rubrum
Pathway
hrm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hrm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    K6T25_04505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hrm03400]
    K6T25_04505
Enzymes [BR:hrm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     K6T25_04505
DNA repair and recombination proteins [BR:hrm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     K6T25_04505
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: QZY00365
Position
856623..857474
AA seq 283 aa
MSADSDATLRIGAHESIAGGTYNAVDALVDDGGNCGQIFTHSPQVWQSPNIDDDEAEQFR
GLSDEHGVGPWVIHSSYLVNLCTPKDDLREKSVDSMQEEVDAAATLDIPYVNVHLGAHTG
AGVEQGLDNAASALDELEVPDGVTVLVESDAGSGTKLGGDFEHLAAVLERSEQDLDICLD
TAHAFAAGYDLSTAEGVAETVAELDEVVGLEHLECVHLNDSKHECGTNKDEHAHVGEGRI
GEEGMRAFINHEDLRDVPLVLETPTEDGKSFAWNIERVRELRE
NT seq 852 nt   +upstreamnt  +downstreamnt
atgagcgcagacagcgacgcgacgctccggatcggcgcccacgagtccatcgccggcggc
acgtacaacgccgtcgacgcgctggtcgacgacggcggcaactgcggccagatcttcact
cactccccgcaggtgtggcagagtccgaacatcgacgacgacgaggccgagcagtttcgc
gggctgagcgacgaacacggcgtcggcccgtgggtcatccactcgtcgtacctcgtgaac
ctctgcacgccgaaggacgacctccgcgagaagtcggtcgactccatgcaggaggaggtc
gacgccgccgcgacgctcgatatcccgtacgtgaacgtccacctcggcgcccacaccggc
gcgggcgtcgagcaggggctcgacaacgccgcgagcgccctcgacgagctcgaggtcccc
gacggcgtgaccgtcctcgtcgagtcggacgccggctcgggcaccaagctcggcggcgac
ttcgagcacctcgcggccgtgctggagcgctccgagcaggacctggacatctgcctcgac
accgcccacgcgttcgccgcgggctacgacctctcgacggccgagggcgtcgcggagacg
gtcgccgaactcgacgaggtcgtcgggctggagcatctggagtgcgtccacctcaacgac
tcgaaacacgagtgcgggacgaacaaagacgagcacgcccacgtcggcgagggccgcatc
ggcgaggagggcatgcgcgcgttcatcaaccacgaggacctgcgcgacgtgccgctcgtg
ctggagacgccgacggaggacggcaagtccttcgcgtggaacatcgagcgcgttcgcgag
ctccgcgagtaa

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