KEGG   Hirundo rustica (Barn swallow): 120760196
Entry
120760196         CDS       T09369                                 
Symbol
TUBB1
Name
(RefSeq) tubulin beta-1 chain isoform X1
  KO
K07375  tubulin beta
Organism
hrt  Hirundo rustica (Barn swallow)
Pathway
hrt04145  Phagocytosis
hrt04517  IgSF CAM signaling
hrt04540  Gap junction
hrt04814  Motor proteins
hrt05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    120760196 (TUBB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    120760196 (TUBB1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    120760196 (TUBB1)
  09142 Cell motility
   04814 Motor proteins
    120760196 (TUBB1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120760196 (TUBB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hrt03036]
    120760196 (TUBB1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hrt04812]
    120760196 (TUBB1)
   04147 Exosome [BR:hrt04147]
    120760196 (TUBB1)
Chromosome and associated proteins [BR:hrt03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     120760196 (TUBB1)
Cytoskeleton proteins [BR:hrt04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    120760196 (TUBB1)
Exosome [BR:hrt04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120760196 (TUBB1)
  Exosomal proteins of colorectal cancer cells
   120760196 (TUBB1)
  Exosomal proteins of bladder cancer cells
   120760196 (TUBB1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 120760196
NCBI-ProteinID: XP_039936121
Position
16:3562427..3566481
AA seq 451 aa
MREIVHLQIGQCGNQIGSKFWEVLGDEHGIDITGNYRGDSPLQLERINVYFNEAYSHKYV
PRSILVDLEPGTMDSVRSSKIGPLFRPDNFIHGNSGAGNNWAKGHYTEGAELIENVMDVV
RNECESCDCLQGFQLIHSLGGGTGSGMGTLLINKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNAILSIHQLIENTDETFCIDNEALYDICFRTLKLTNPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDARNMM
AACDPRRGRYLTVACIFRGRMSTKEVDEQLLSVQTKNSSYFVEWIPNNVKVAVCDIPPRG
LKMAATFIGNNTAIQELFIRVSEQFSAMFRRKAFLHWYTGEGMDEMEFSEAEGNTNDLVS
EYQQYQDATADVEEFEEVEVEAEAKPEKEAE
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgaaatcgtgcacctgcagattggccagtgtgggaaccaaattggatccaagttc
tgggaggtgctcggtgatgaacatgggattgacatcactgggaactaccgtggggattca
ccactgcagctggagcgaattaatgtatacttcaatgaggcttactcccataaatacgtg
ccccgttccatcctggtggacctggagcctgggacgatggacagtgtccggtctagcaaa
atcggccccctcttccgacctgacaactttatccacggtaattcaggtgctggcaacaac
tgggccaagggccattacacagaaggtgccgaactgatcgaaaacgtcatggatgtggtc
aggaacgagtgtgagagctgtgactgccttcagggattccagctcatccattcccttggc
ggtggcacaggctcaggcatggggacgctcctcatcaacaagatcagagaggaatatccc
gacaggatcatgaacaccttcagcgttgtgccctcacccaaggtatccgacacggtggtg
gagccctacaacgccatcctctccatccaccagctgatagagaacacagacgaaaccttt
tgcattgacaacgaagctctgtatgatatatgcttcaggacattaaagctcaccaatccc
acctatggggacctcaaccacttggtgtccctaacgatgagcggcgtcaccacctcgctg
cgtttccctggccagctgaacgccgatctgcggaagctggcggtgaacatggtgcccttt
cctcgcctgcacttcttcatgcccggctttgccccgctgacagctcggggcagccagcag
taccgggccctgacggtgccagagctcacccagcagatgttcgacgcccggaacatgatg
gcagcctgcgacccccgccgcgggcgctacctcaccgttgcctgcatcttcaggggcaga
atgtccaccaaggaagtggacgagcagctgctgtccgtccagaccaagaacagctcctac
tttgtggagtggatccccaacaatgtgaaagtggccgtgtgcgacatcccgccgcgaggg
ctgaagatggcagccacgtttattggcaataacacggccatccaggagctcttcatcagg
gtgtccgaacagttctcggccatgttcagaaggaaagcgtttctccactggtacacgggg
gagggcatggatgagatggagttttctgaagcagaaggtaacaccaatgacctcgtgtcc
gagtaccaacagtaccaggatgctactgcagacgtggaggaatttgaagaggtagaagtg
gaagcagaagccaagccagaaaaggaagcagagtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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