KEGG   Hippoglossus stenolepis (Pacific halibut): 118116132
Entry
118116132         CDS       T08308                                 
Name
(RefSeq) tubulin beta-4B chain
  KO
K07375  tubulin beta
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04145  Phagocytosis
hsp04517  IgSF CAM signaling
hsp04540  Gap junction
hsp04814  Motor proteins
hsp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    118116132
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    118116132
  09144 Cellular community - eukaryotes
   04540 Gap junction
    118116132
  09142 Cell motility
   04814 Motor proteins
    118116132
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118116132
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsp03036]
    118116132
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hsp04812]
    118116132
   04147 Exosome [BR:hsp04147]
    118116132
Chromosome and associated proteins [BR:hsp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     118116132
Cytoskeleton proteins [BR:hsp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    118116132
Exosome [BR:hsp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118116132
  Exosomal proteins of colorectal cancer cells
   118116132
  Exosomal proteins of bladder cancer cells
   118116132
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 118116132
NCBI-ProteinID: XP_035023377
Position
10:complement(20638949..20642329)
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPSGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGEEELA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggagatcgtgcacctgcaggccggccagtgcggcaaccagatcggagccaagttc
tgggaggtgatcagcgacgagcacggcatcgacccgtccgggacgtaccatggcgacagc
gacctgcagctggagcggatcaacgtctactacaacgaggcgacaggtgggaagtacgtc
cctcgtgcggtgctggtggacttggagccaggaacgatggactctgtgaggtcgggtcct
tttggccagatctttagaccagacaactttgtgtttggccagagcggagcaggtaataac
tgggccaaaggccactacactgagggagccgagctggtagactctgtcctggatgtggtg
aggaaggaggcagagggctgcgactgcctccagggcttccagctcacacactccctgggc
ggaggaaccggttctggcatgggcacgctgcttatcagcaaaattcgagaggagtatcct
gatcgcatcatgaacactttcagcgtagtgccctcacccaaggtgtcagacacggtggtg
gagccgtacaatgccaccctgtcagtccaccagctggtggagaacacagatgagacctac
tgcattgataatgaggccctgtatgacatctgcttccgtacactgaaactcactacaccc
acctatggtgacctcaaccaccttgtctcagccaccatgagcggggtgaccacctgcctg
cgctttcccggccagctcaatgctgatctgaggaaactggctgtcaacatggtgcccttc
cccaggctgcacttcttcatgccaggctttgcccccctgaccagtcggggcagccagcag
tacagggcactgacagttcctgaactcacccagcagatgtttgatgccaaaaacatgatg
gcggcttgtgacccacgccacgggcgctaccttactgtcgccgccatcttccggggccgc
atgtccatgaaggaggtggacgagcagatgttgaacgtgcaaaacaagaacagcagctac
tttgtggagtggatccccaacaatgtcaagacggccgtctgcgacatccctccccgcggc
ctcaagatgtcctccactttcattggcaacagcacagccattcaggagctgttcaaacgc
atctcagagcagttcactgccatgttccgccgcaaggccttcctccactggtacacgggc
gaaggcatggacgagatggagttcacagaggctgagagcaatatgaacgacctggtgtcc
gagtaccagcagtaccaggacgccactgctgaggaagagggcgagtttgaggaggaaggc
gaagaggaattggcctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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