KEGG   Hippoglossus stenolepis (Pacific halibut): 118120426
Entry
118120426         CDS       T08308                                 
Symbol
tank
Name
(RefSeq) TRAF family member-associated NF-kappa-B activator isoform X1
  KO
K12650  TRAF family member-associated NF-kappa-B activator
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04140  Autophagy - animal
hsp04621  NOD-like receptor signaling pathway
hsp04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    118120426 (tank)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    118120426 (tank)
   04622 RIG-I-like receptor signaling pathway
    118120426 (tank)
SSDB
Motif
Pfam: TBD DUF4515 PRP21_like_P Prefoldin_2
Other DBs
NCBI-GeneID: 118120426
NCBI-ProteinID: XP_035031208
Position
13:12062119..12066875
AA seq 342 aa
MERNIGDQLNKAFEAYRQVSIEKDNAKKELQKMTEYYEGHTQTLQKQIDDQQQLIVKLQV
KLTSMRPLSADEMKCEPCNHLLDGASAYRIKQYPENMGPVAVSSKLPVNSRVDYKDMLDV
FEAIQGKFRQIRSLTQRQKDHLKRFHGGNETSNDQQFSMPIQCTDRTAEAGGPLPSVLRS
AVDIPHQPTSLASRGASPEDRDLVDSLTKLSVKFPPSADSEYDFLNSAPDRHFGLMMPLK
PPLSGDPSAMTEEEPVELPMPFVYPPSPSHSTSSSLSQESVRGPQQPLWSPELCDAVDVG
TELATPQSSSPDKCAFCHAVVPQDQMNSHLYSHFSPKSEDDN
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggaaaggaacattggagaccagctcaacaaagctttcgaagcttatcgccaggtctcc
atcgagaaggacaatgctaaaaaagagctgcagaaaatgactgaatattatgagggacac
actcaaacacttcagaagcagatagacgaccagcagcagttgattgtaaaacttcaggtg
aagttgacatcaatgaggccactgtcagcagatgagatgaaatgtgagccctgcaaccat
ctcctcgatggggccagtgcctataggataaaacagtacccggagaatatgggccctgtt
gctgtttcttcaaaattaccagtcaacagcagagttgactacaaggacatgctggatgta
tttgaagcaattcaagggaaatttcggcagattcggtctctaacacaaagacaaaaagac
cacctgaaaagattccatggaggaaacgaaacatcaaatgatcagcagttctccatgccc
atccagtgcacggaccgtacagcagaggcagggggacccttaccctcagtgctcaggtca
gcagtggatatcccccaccagcccacgtcgctggcgtcccgcggcgccagccctgaggac
cgggacttagtagactctctcaccaaacttagtgtcaaattcccgccctctgcagacagt
gaatatgacttcctgaacagtgccccagacagacactttggtctcatgatgcctctgaag
ccaccgctcagtggtgacccatctgcaatgacagaggaggagcccgtggaactgcccatg
ccttttgtctaccctccgtccccctcccactccacatcatcttcgctctcccaggagagt
gtgcggggaccccagcagcctctctggagccctgagctgtgtgatgcagttgacgtgggg
acagagctggcgacgcctcagagcagcagtcctgataaatgcgctttctgccacgctgtg
gttcctcaggaccaaatgaacagccacctctactcgcatttctctcctaagagtgaagac
gacaattga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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