KEGG   Billgrantia sulfidoxydans: HNO51_18525
Entry
HNO51_18525       CDS       T08035                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
hsx  Billgrantia sulfidoxydans
Pathway
hsx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hsx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HNO51_18525
  09124 Replication and repair
   03420 Nucleotide excision repair
    HNO51_18525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsx03021]
    HNO51_18525
   03036 Chromosome and associated proteins [BR:hsx03036]
    HNO51_18525
   03400 DNA repair and recombination proteins [BR:hsx03400]
    HNO51_18525
Enzymes [BR:hsx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     HNO51_18525
Transcription machinery [BR:hsx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     HNO51_18525
Chromosome and associated proteins [BR:hsx03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    HNO51_18525
DNA repair and recombination proteins [BR:hsx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     HNO51_18525
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD HBB ResIII
Other DBs
NCBI-ProteinID: QTP57198
Position
complement(4003039..4005357)
AA seq 772 aa
MAHAATPRYRVAVRALCDFTAREGDLDHRFTPSPSAREGIAGHALVTGRREEGYEREIVL
SGCHRGLLVSGRADGYDPRHNRLEEIKTHRGDLSRMAANQRALHWAQVRVYGALLCAERG
LDSLTLALVYLDIGSERETLLTETASAADLTAFFEAQCERFLGWAEQEAQHRQARDTALA
DLDFPHAEFRPGQRELAEGVYKAAATGRCLLAEAPTGIGKTVATLFPTLKAMPRQGIDRL
AFLTMKTPGRRLALDALARLGTAGQGGGGAGDRQRHLPLRVLELTARSKVCEHPDKACHG
DACPLAAGFYDRLPSARQAAVARGWLDREALRQVAREHGICPYYLGQELARWSDVCVGDV
NHYFDASALLYGLAQANGWRLALLVDEAHNLVERARGMYSGELHQRAFGQLHRSAPAPLV
KPLGRLMRQWQALVREQGGADEGQAGQPTYRVLDDLPARFVGALQQAAAAITDYLAEHPG
GADPLLQERLFEALGFCRLAESFGEHSLCDLTRHGRGRAVLGLRNLIPADFLAPRFAQAH
SSVLFSATLSPVAYHRDLLGVPGQSVRLSVASPFRAEQLEVRIQGAISTRLRDREASLDP
IVDELAGQYRRRPGLYLAFFSSFAYLQAVEARLARRHPELPCWSQSRGMREAERDAFLAR
FQPGAQGIGFAVLGGAFGEGIDLPGERLIGAFIATLGLPPFDPFNEALKARLESRFGCGD
AYAYRIPGLIKVIQAAGRVIRSPQDRGTLVLMDDRFQRHEVRQLLPEWWRTA
NT seq 2319 nt   +upstreamnt  +downstreamnt
atggcgcatgccgcaacgccgcgctaccgggtggccgtgcgggcactgtgcgacttcacc
gcccgcgagggcgacctcgaccaccgcttcacgccctcgcccagtgcccgtgagggtatc
gccggccatgccctggtgacggggcgccgcgaagagggctacgagcgcgagatcgtcctg
agtgggtgtcaccgcggcctcctcgtcagcgggcgggccgatggctatgatccgcggcac
aaccggctcgaggagatcaagacccatcgcggcgacctgtcgcgcatggccgccaaccag
cgcgccctgcactgggcccaggtcagggtctacggggcgctgctgtgcgccgaacgaggg
ctcgactccttgaccctggcgctggtctacctcgacatcggcagcgagcgcgagacactg
ctcaccgagacggccagcgccgccgatctcaccgccttcttcgaggcccagtgcgagcgc
ttcctgggctgggccgagcaggaggcgcagcatcgccaggcgcgcgacaccgccctagcc
gacctggacttcccccacgccgagtttcgtcccgggcagcgtgagctggccgagggcgtc
tacaaggcggcagccaccggtcgctgcctgctggccgaggccccgaccggcatcggcaaa
accgtggccacgctgtttcccacgctcaaggcgatgccgcgccaaggcatcgatcggctc
gccttcctgaccatgaagaccccggggcggcgcctggcgctggatgccctggcccggctg
gggaccgccggccagggcggaggaggggccggggaccgccagcggcatctgcccctgcgg
gtgctggagctgaccgcccgcagcaaggtctgcgagcatcccgacaaggcgtgtcatggc
gatgcctgcccgctggccgccggcttctacgaccgcttgcccagcgcccgtcaggccgcg
gtcgcgcggggctggctcgatcgtgaggcgctgcgccaggtggcgcgcgagcatggtatc
tgcccctattacctggggcaggagctggcacgctggagcgacgtctgcgtgggcgacgtc
aaccactacttcgatgcgtcggcgctgctgtacggcctggcccaggccaatggctggcgc
ctggcgctgttggtggacgaagcgcacaacctggtggagcgggcccgcggcatgtacagc
ggtgagctgcaccagcgcgccttcggccagttgcaccgcagtgcccccgcgccgctggtg
aagcccctcgggcggctgatgcgccaatggcaggccttggtgcgggaacagggcggcgcc
gacgagggccaggcgggccagccgacctaccgcgtcctcgacgacctgcccgcgcggttc
gtcggcgccctgcagcaggcggctgcggcgatcaccgactatctggccgagcacccgggc
ggcgccgacccgctcctgcaggagcggctgttcgaggccctgggcttctgtcgcctggcc
gagtcgttcggcgagcactcgctgtgcgacctgacccggcacggtcgcggtcgcgcggtg
ttgggcctgcgcaacctgatcccggcggatttcctggcgccgcgcttcgcccaggcgcac
agcagcgtgctgttctcggcgaccctgtcaccggtggcctaccaccgtgacctgctgggc
gtgcccggccagagcgtgaggctgtcggtcgcctcgccgtttcgcgccgagcagctcgag
gtgcgcatccagggcgccatctcgacgcgcctgcgtgaccgcgaggcctcgctcgacccc
atcgtcgacgagctggccggccagtaccgccgccgccccggtctctatctcgccttcttc
agcagtttcgcctacctgcaggccgtggaggcgcggctggcacgccgccaccccgagctg
ccctgctggagccaatcccgcggcatgcgtgaagccgagcgcgatgcgttcctggcgcgc
tttcagccgggtgcgcagggcatcggcttcgcggtgctgggcggggctttcggcgagggc
atcgacctgcccggcgagcggctgatcggcgccttcatcgccaccctgggtctgccgccg
ttcgatcccttcaacgaggcgctcaaggccaggctggagtcgcgcttcggctgtggcgac
gcctatgcctatcgcatcccgggactgatcaaggtgatccaggccgccggcagggtgatc
cgcagccctcaggatcgcggcacgctggtgctgatggacgatcgcttccagcggcacgag
gtgcgtcagctgttacccgaatggtggcgaacggcgtga

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