KEGG T09559: 120138732

Hibiscus syriacus (Rose-of-Sharon): 120138732

Entry

120138732         CDS       T09559

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

hsyr Hibiscus syriacus (Rose-of-Sharon)

Brite

KEGG Orthology (KO) [BR:hsyr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsyr03041]
    120138732
Spliceosome [BR:hsyr03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    120138732
Complex C
   U4/U6.U5 tri-SnRNP related factors
    120138732

SSDB

Motif

Pfam:

MA3

Other DBs

NCBI-GeneID:

120138732

NCBI-ProteinID:

XP_039010079

Position

Unknown

AA seq 879 aa
MGRGYSESSDNESRDVGREHRSRGLRYSRSDRERGRRESEREKGRNHDDEDNRQRENSGS
FDVDRRANRDGRRESQRIHDDDNSKDGPREGRSRSGEEDGKHVNRDRRRESERIHVGGTD
RRREERSRSSDEEDDKRSYGDKRRERERIHDGDDKVRERERIYNGDDDSKTRKRDTPEES
SESSDKSEERQAKRDRRGRRDRSNRHDTRNRDRHNERRRESEEDRYINRDRRHHSHHYSD
DDHRKGSHRNTERENRSDRRDSDNQLSRRDRDDNKEKEEGEIKLKQSALQQTNLNGDTAN
LGRSGGVYIPPFKLARMMKETQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPEL
FAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGELLLRRIVLQLKRAY
KRNDKPQLLAAVKFVAHLVNQQVAHEIVALELLTVLLENPTDDSVEVAVGFVTECGSLLQ
DLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQ
LTHEISLQDEIDPEITLDIFKPDPQFLENEKRYEEVKKTILGEESEGEEGSDAGSGDEED
EDDDESDEEDEEKMKIQDETETNLINLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEME
LCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFDKCFVQQYSMIHRLETNKLRNVA
KFFAHLLGTDALPWHVISYIRLTEEDTTSSSRIFIKILFQELSEHLGIRRLNERLSDPTM
MDSFESIFPRDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQEPASGSESGD
ESERPSSSDSGSASSESESETESSSSDESEKRRRKRRRK

NT seq 2640 nt +upstreamnt +downstreamnt
atgggtagaggatatagtgaatcgagtgacaatgaatcgagagatgtgggtagggaacat
cgaagtcgtggccttaggtattctaggtcagatagagaaaggggaagacgagaaagtgag
agagaaaaaggaagaaatcacgatgatgaggataatcggcaaagagaaaactccggatct
tttgatgtagacaggcgtgctaatagagatgggaggcgagaaagtcagagaattcatgat
gatgataattctaaggatggaccaagagaaggccgttctagatctggtgaagaagatggt
aagcatgtaaatagagataggaggcgggaaagtgaaagaattcatgttggtggtacggat
aggaggagagaagagcgttctagatcttctgatgaagaagatgacaagcgttcctacggg
gataaaaggcgtgaaagagaaagaattcatgatggtgatgataaagtgcgggaaagagaa
agaatttacaatggtgatgatgattccaagaccaggaagagagatacacctgaggaaagt
tccgaatcttctgataaatcggaggagaggcaagccaagagggacaggaggggaagaagg
gatagaagtaatagacatgacactagaaatagggataggcataatgagaggcggcgggaa
tctgaagaagatagatatataaatagggaccgacgtcatcattcgcatcattattctgat
gacgatcacagaaaagggtcccatagaaatacagaacgtgagaatagaagtgataggaga
gacagcgataatcagttaagccgtagagacagagatgataataaggagaaagaagaaggg
gaaatcaagctgaaacaatcagcattgcaacaaaccaacttgaatggtgacacggcaaat
ttaggtaggagtggaggagtttacattcctccatttaaattagcaaggatgatgaaagag
acacaagataagagcagtgtcgagtatcagcggttaacatgggatgcccttagaaaaagt
atcaatgggcttgttaacaaggtcaatgctactaatataaagaatattattccagaactc
tttgctgagaatcttattcgaggaaggggtctcttttgtcgttcttgcatgaaatctcag
atggcatctccgggtttcacagatgtttttgctgcattggtggccgttgttaataccaag
tttcctgaggtgggggagctattgttgagaaggattgttttgcagcttaagagagcatat
aagcggaatgacaagcctcaattattggcagctgttaaatttgtagcacatcttgtgaac
cagcaagtggctcatgaaattgttgctttggaactactcactgttttgctggaaaatcct
accgatgacagtgttgaggtggctgttggttttgttacagagtgtggttcattacttcaa
gatctttcaccaaaaggcctccatggtatctttgagcgatttcgggggattcttcacgag
ggagagatagataaacgtgttcaatttttaatagagggcttatttgctataaggaaagca
aagtttcagggttaccctgcagttcgtccagaactagaccttgttgagcaggaggaccaa
ttaactcatgaaatatctctccaagatgagatagatcccgagatcacccttgacattttt
aaaccagatcctcagttcttggagaatgaaaagcgctatgaagaggtgaagaaaaccatc
cttggtgaagaatctgagggtgaagaaggctcagatgcaggttcaggtgacgaggaggat
gaggatgatgatgaatcagatgaggaagatgaagagaagatgaaaatacaagatgagaca
gagacaaatcttataaatcttaggaggacaatctacttgacaatcatgtccagtgtagat
ttcgaggaggctggtcacaagctgctgaaaattaagcttgagcccgggcaagagatggag
ttatgcattatgctcctggaatgctgtagtcaggagagaacataccttcgatattatggt
cttctggggcagcggttttgcatgatcaacaaagtccatcaggaaaattttgataaatgc
tttgttcagcagtattctatgatccatcgccttgaaacaaacaaactacgcaatgtggca
aagttttttgcacatttactcggcacagatgctctgccgtggcatgttatatcctacata
cgcttaactgaggaggacacaacctcttcttcccgaatatttataaagatcctcttccag
gaattgtcggagcatctcggaatccgcagactgaatgaacggctatcggatccaacgatg
atggactcctttgaatctattttcccaagggataatcccaagaacactagattttcaatc
aacttcttcacttcaattggtctcggtggtataactgagaatttgcgtgaatatttgaag
aacatgccccggcttattatgcaacaacaggaaccagcatctggatcagaatcgggtgat
gaatctgaaaggcctagttcatcagattcaggaagtgctagttcagaatcggagtcagag
acagaatcatcaagttccgacgagagtgaaaagcgccggaggaagaggagaagaaaatga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (5)   

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