KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123404828
Entry
123404828         CDS       T11213                                 
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    123404828
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hvg03019]
    123404828
Enzymes [BR:hvg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     123404828
Messenger RNA biogenesis [BR:hvg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     123404828
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central DNA_pol_B_palm Nrap_D2
Other DBs
NCBI-GeneID: 123404828
NCBI-ProteinID: XP_044954707
Position
6H:complement(216283776..216291137)
AA seq 696 aa
MAGSVGTGRVAPRSSPKRYNGMDPPLSLTRPTMFDLQKTAELEKFLVEAGLYESKEQSAK
REEVLREIDVIVKGWVKQLTSQKGYSEQMIEKANVVLFTFGSYRLGVHGPGADIDILCVG
PSYVNREEDFFVTLHGILTQLEEVTEIQPVPDAHVPLMKFKFHGMAIDLLYASVSLAVIP
PDFDISEGSVLSGVDESTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAERRGVYSN
VTGFLGGVNWAILVARICQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDLGFSV
WDPRKNPRDRSHVMPIITPGYPCMNSSYNVSSSTLRVIMEQFKLGNKICQEIDLNKASWT
ALFEPFNFFEAYTKYLVVDIVADNDDDLRLWKGWVESRLRQLTLKIERDTNGMLQCHPYP
CDYANPRVQCAHCSFYMGLSRKEGMKIHGQKFDIRGTVDDFMHEIGMYTLWKSGMDLAVT
HVRKKQIPYYVFEQGYKKPCPPVHANQQEQSDRQCDFDGAGHIESCKSVKRSSVSPGYEE
SQPEYGSIVSKIVCENTVKLVSSALYNGVQNRLSHGDVNLESANCPSSPHGSEESAASGT
CCAAVETVHMSDETVGPESSMTCVINGTVQTMAVHTPLKCVAEKDEPKFEGIGSLPNSNS
AKFMEQTEMLTGNVLDYAGAKLVVSRSQKASIRPVS
NT seq 2091 nt   +upstreamnt  +downstreamnt
atggcgggatctgtgggcacaggcagggtggcacctcgctcgtccccaaagcggtacaac
ggcatggatccgccgttatctttgaccaggccgaccatgttcgatctgcagaagacggct
gagctcgagaagttcttggttgaagcgggcctttacgagagcaaggagcagtccgcgaaa
cgggaggaggtgctacgggagattgatgtgatagttaagggatgggtgaagcagttaact
agtcagaaagggtattctgagcaaatgattgaaaaggcaaatgtagtccttttcactttt
ggatcttatcgcttgggggttcatgggcctggagcagacattgatatcttatgtgttgga
ccttcatatgtgaaccgagaggaggatttctttgtcacactacatggcatattaacacaa
ctggaagaagtgactgaaatacaacctgtacctgatgctcatgtacctcttatgaaattt
aagttccacgggatggcaattgaccttctctatgccagtgtatctcttgcagtaatacca
ccggacttcgacatctctgaagggtctgtgctttctggtgttgacgaatcaactgttcga
agtcttaacgggtgcagggtggcagaccaaattcttcgacttgttccaaatgttgagaac
ttccggacaacactcaggtgcttgaagtactgggcagagagaaggggcgtttattccaat
gttactggtttcctcgggggtgtcaactgggccatattggttgctcgtatctgccaactg
tatcctaatgctgtaccaagtatgctggtctcaagattcttccgagtttttacacagtgg
cagtggccgaatccagtgatgctttgtgccattgagaatgatgatcttggtttttctgta
tgggatccacgtaaaaatcctcgtgatagatctcatgttatgcctatcattactccaggc
tatccgtgcatgaactctagctacaatgtatcttctagcacattgagggttatcatggag
caatttaagcttggtaataagatttgtcaggaaattgaccttaataaggctagttggact
gccttgtttgagccttttaattttttcgaggcatatacaaagtatctagtggttgacatt
gttgcggacaatgatgatgatctccggctttggaagggatgggttgagtctcgactaaga
cagctgactttgaagatagagcgggatactaatggaatgctgcaatgccatccttaccca
tgtgactatgcaaatcctagagtacagtgtgctcattgctccttctatatgggcttatca
aggaaagaagggatgaaaatacatggtcaaaaatttgatattcgtggaacggtagatgat
tttatgcatgaaattggaatgtacacattgtggaagtctggaatggatctagcagtcacc
catgttcgtaagaagcagatcccttattatgtatttgaacagggttacaagaaaccttgt
ccaccagtgcatgcaaaccagcaagagcagtctgatagacagtgtgattttgatggagct
ggtcacatcgaatcatgtaaatctgttaaaaggtcttcagtaagcccaggctacgaggaa
agtcaacctgaatatggaagcatcgtaagtaaaattgtatgtgagaacacagtcaaattg
gtttccagtgccctctataatggagttcagaatagactgtcgcatggcgatgttaatttg
gaatcagcaaattgccccagttcaccacatggatctgaggagtctgcagcatcaggcaca
tgctgtgcagctgtggaaacagttcacatgtctgatgaaactgttggtcctgaaagctca
atgacatgtgttatcaatggtacggttcagacaatggcagtgcacacacctttaaaatgt
gtggctgagaaagatgaacccaagtttgagggaattggtagcttgccaaacagcaattct
gccaagtttatggagcagacagaaatgctcactggaaacgtccttgattatgcaggtgcc
aaattggttgtatccagaagccagaaagcttcaattaggcctgtgtcctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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