KEGG T09217: 124364161

Homalodisca vitripennis (glassy-winged sharpshooter): 124364161

Entry

124364161         CDS       T09217

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1

K13100

pre-mRNA-splicing factor CWC22

Organism

hvi Homalodisca vitripennis (glassy-winged sharpshooter)

Brite

KEGG Orthology (KO) [BR:hvi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hvi03041]
    124364161
Spliceosome [BR:hvi03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    124364161
Complex C
   U4/U6.U5 tri-SnRNP related factors
    124364161

SSDB

Motif

Pfam:

MA3 MIF4G Cnd1

Other DBs

NCBI-GeneID:

124364161

NCBI-ProteinID:

XP_046675370

Position

6:complement(24815046..24839006)

AA seq 894 aa
MGDSDFSGSEEITKKHKHRKRKRTALEENKKRRRSSSMDSSDFQKLKNKKNKSRKDSGNE
SNDDSSYYKNKPKKSSYTSESRNKRSVANDSDERKYGSSSRRNKDTSKEYSGSRKKKSSR
DVAEDDYITDRKKTKDSQKVTEDRNSERERDYKNTGSEKNSSRKNKNDDDMACERYDRGS
PLHDSEENGRNSSTGSEKPYRYWSTSRGPVRKNSDSYWNKYSERLKEQPENVEVGPRYYS
VNDSPKNENSKTSNEKSKGNKKENAEVEKVAPTPRPKKVIDDLTTRTGGAYIPPAKLRMM
QESITDKASAAYQRLAWEALKKSIQGHVNKVNTSNIQVILKAVQKENIVRGRGLLCRALI
QAQAASPTFTNVYAAFIAALNAKFPKLGELLLKRLVVQFRRGFKRNDKTICITAATFIAH
LVNQEVAHEILALEILTLLIETPTDDSVEVAIAFLKECGMKLTEVSSKGILAIFDMLRNI
LHEGKLEKRVQYMIEVMFQIRKEDFKAHPSLISELDLIDEEDKIQHMITLEDNHDPEDIL
NVFKLDPDYEANEAKYKSLVGDSDDESGEDGSDGSGDSDDDSEEEEGGGEEGESKGVIID
KTETNLVALRKTIYLTIQSSLDFEECAHKLLRMELKPGQEIEMAHMFLDCCAEQRTYEKF
FGLLSQRFCQINRTYVGPFEETFRDSYATIHRMSNDKLRNVAKLFAHLLYTDAISWEVLS
TVRLNEDDTTSSSRIFIKILFQELSEYMGLIKLNQRVKDPSLQTALEGLFPRDNPKHTRF
AINFFTSIGLGGLTDELREHLKAQPKQSIVVPQLVEGLSSSSSSSSDSSSSSSSDSSSDS
SSSESSSSDSEGTSSRRKRKGKPVNKNKKQPTKKVEKATSKKSKITPSKRKRDR

NT seq 2685 nt +upstreamnt +downstreamnt
atgggcgattcagatttctcaggtagtgaagaaataaccaagaaacataaacataggaaa
cgcaaacgtactgcattagaagaaaacaaaaaaagaagacgttcaagcagtatggacagc
agtgattttcaaaagctaaaaaacaaaaaaaataaatcaagaaaggactctggaaatgag
tctaatgatgatagttcatattataaaaataaacctaaaaagtcttcttacacctctgag
agtagaaacaaacgtagtgtcgcaaatgatagcgatgaacgaaaatatggttcttctagt
agacgaaacaaggacacttctaaagagtattctggttctagaaagaaaaaatcttcaaga
gatgttgctgaagacgattacataacggaccgtaaaaagacaaaagattcacagaaagtc
actgaagataggaattctgaaagagaaagagactataaaaatacgggaagtgaaaaaaat
tcaagcagaaaaaataagaatgatgatgatatggcttgtgaaagatatgacaggggcagt
cctttacatgatagtgaagaaaatggcagaaattcaagtacaggttccgagaagccctac
agatattggagtacctcgcgaggtcctgtgaggaaaaacagtgacagctattggaacaag
tacagtgaacgtttgaaagaacaaccagaaaatgtggaagtaggaccgcggtattatagt
gttaacgacagtcctaaaaatgagaattccaaaacctccaatgagaaaagcaaagggaat
aagaaagagaatgctgaagtggaaaaagtggctccaactccaagaccgaaaaaggtaatt
gatgacttaacaactcggactggtggagcctacatacctccggcgaagttgaggatgatg
caggaaagcataacggataaagcgagtgctgcttatcaacggttggcgtgggaggcgttg
aagaagtccatccaaggacatgtgaacaaggtgaacaccagtaacatccaggtgatcctg
aaggcagtgcagaaggagaacatagtaagaggtcgagggctgttgtgtcgggccttgata
caggctcaggcagcctcgcccacattcacaaatgtttatgcagccttcatcgccgcgttg
aacgccaagtttcccaagttgggcgagttactgttgaaaaggttggttgtgcagttccgt
cgagggttcaaacgtaatgacaaaactatctgtatcacggcagccaccttcattgctcac
ttggtcaatcaagaagtggcacatgagattctagcactagaaatcttgactttgctgata
gagacgcccacagatgattcagtcgaggtggccatcgccttcttgaaggagtgtggtatg
aagctgactgaagtatccagcaaaggcatcctcgcaatatttgacatgctccgcaatatt
cttcatgaaggaaaattagagaaaagagtgcaatacatgattgaagtgatgtttcaaatt
cggaaagaagacttcaaggctcacccttccttgatatcagaactcgatttgattgacgaa
gaagacaaaatccaacatatgatcaccttggaagataatcatgatccggaagatattttg
aatgtgttcaagttggacccggactatgaagcgaatgaggccaagtataagtcgctggtt
ggagacagcgacgacgagtctggcgaggatggtagcgacggcagtggggactctgatgat
gactcagaagaagaggaggggggaggggaagaaggagagagcaagggtgtgataatagac
aagacggagaccaacctagtggcactgaggaagaccatatacctgacgatccagagcagc
ttggatttcgaggagtgtgcccacaaactgttacggatggagctgaagcccggacaggag
attgagatggcccacatgttcctggactgttgtgcagagcaacgcacctatgagaagttc
tttggacttctgtctcagagattctgccagatcaaccgcacttatgttgggccttttgag
gagacgttcagggacagctatgccacgatacaccgtatgtccaacgacaagctgcgcaat
gtcgccaaactgttcgcacaccttctgtacacggatgcgatctcgtgggaagtactgtca
acggtccgactcaacgaagatgacaccaccagctccagtcgcatcttcattaagatactg
ttccaggagctctccgagtacatggggctcatcaagctcaaccagagagtcaaggatcca
agtctgcagactgctctggaaggtttgtttccacgggacaatcccaaacatacgaggttt
gccatcaacttcttcacatcaattggacttggaggtcttacggatgaactgcgggagcac
ttaaaggcacaacccaaacagagtatcgtggtaccgcaactggttgagggtctttctagc
tcctcctcttcctcgtccgattcgtcttcatcttcatcgtcagactcctcttctgacagc
tcgagttcagagtcatcaagttctgattctgaaggcacatccagcagaagaaaacgaaaa
ggaaaaccagtcaacaaaaacaaaaaacagcccacaaaaaaagtggagaaggcaacgtct
aaaaagagtaaaatcactccgtcaaagagaaaaagggatagatga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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