KEGG   Ictalurus furcatus (blue catfish): 128601106
Entry
128601106         CDS       T09387                                 
Symbol
papola
Name
(RefSeq) poly(A) polymerase alpha
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    128601106 (papola)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ifu03019]
    128601106 (papola)
Enzymes [BR:ifu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     128601106 (papola)
Messenger RNA biogenesis [BR:ifu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     128601106 (papola)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central DUF6431
Other DBs
NCBI-GeneID: 128601106
NCBI-ProteinID: XP_053470007
Position
25:14708966..14730926
AA seq 782 aa
MPFPIMSQAQPAQDTPKHYGITSPISMALPKESDLVQTQKLVQALKPFGVFEEELELQRR
ILVLGKLNTLVKEWIQDISTSKNIPPSLIENIGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVDRSDFFTSFYEKLKEQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEN
LDLRDDNLLRNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVYKFFLVFSKWEWPNPVLLKQPVECNLSLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSVSTRNVMIEEFKQGLAIVDEILQNKADWSKL
FEAPNFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF
PGPKESNKTPEFSTMWVIGIGFRKMEGSEHLNVDLTYDIQSFTDTVYRQAISSKMFETDM
KITAMHVKRKQLHQLLPDLVIPKRRKHSTEGLRAVNEGSVDLSLDSDNSMSMPSPTGTSS
SARTSFSASPHRSTGTTASSDSQGKTDTSGGVNPTAACLSEPKTSSGSSPPQEQRRPGSP
LHDENSKNLQLQEHSTANEGSVDLSMDRDNSMSMPSPPKTSFSASPHRSTGTSASSDSQG
KMDTSVNTGPAAACPSETKIPSPASAGKRPSSPLNDEQAKKLRLEEDSTSESVDQAAEFS
QASDFTALDGEVKMETEAAESDAEGKIPPSRKTSSTDLSDVPLPPANPIQVVKNSIKLRL
SR
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgccttttccaattatgagtcaggcgcaaccggcccaggacaccccaaagcattatggg
atcacgtcgcccatcagcatggctctgccgaaagagtcggacctggtgcagacgcagaaa
ctggtgcaggcgctgaagcctttcggtgtgtttgaggaggagctggagctgcagcggaga
atcctggttttggggaaactgaacacgctggtcaaggagtggatccaggatatcagcacg
tccaagaatatacctccatcattgatcgaaaatattggtggaaaaatatttacattcggg
tcctataggttaggagttcacacaaaaggtgctgatatagacgctctgtgtgtcgcccct
cgacacgtggataggtccgacttcttcacctctttttacgagaagttaaaagagcaagag
gaggtcaaagacttaagggctgtcgaagaggcgttcgtccctgtgattaaactgtgcttc
gatggcattgagattgatatcctgtttgctcggttagcactgcagaccattccagagaac
ctggacctgcgggacgataatttactgaggaacctggatatccgatgtattaggagtctg
aacggttgcagggtgacggatgagattctccaccttgtgcccaacattgagaatttcaga
ctcactcttagggccatcaaactgtgggctaaacgccacaacatatattcgaacatcttg
ggtttcttgggcggcgtgtcgtgggcgatgctggtggcgagaacgtgtcagctttacccc
aacgctgtggcttcaaccctcgtgtacaagttcttcctagtgttttctaagtgggagtgg
cctaatccagtccttttgaagcaaccagtggagtgcaacctcagcctgccagtgtgggac
ccaagggtaaccccgagtgaccggtaccacctcatgcccataatcacaccagcttatcct
cagcaaaactctacctacaatgtgtccgtgtccaccaggaacgtcatgatcgaagagttc
aaacagggtctggccatcgtggatgaaatactgcagaacaaagcagactggtccaaacta
ttcgaagctccaaacttctttcagaaatacaagcattatattgtgttgctagcaagtgcg
cccactgagaagcagcacctcgagtgggtcggcctcgtcgagtctaagatccgaatcctg
gtgggaagcctggagaaaaatgagttcatcactctcgcacatgtgaatccacagtcgttc
ccaggacccaaggagagcaataaaacgccagagttcagtacaatgtgggtcattggtatc
gggttcaggaaaatggaggggtctgaacatcttaacgtcgacttgacatacgatatacag
tcattcacagacacggtgtaccgtcaggccattagcagcaagatgtttgagactgacatg
aaaataacggcgatgcacgtgaagaggaagcagcttcaccagctcctgccagaccttgtt
atcccaaaaaggagaaagcattcgactgaaggcctgcgtgctgtcaatgagggcagtgtg
gacttgtctctggacagtgataacagcatgtccatgccctcacccaccggtacctccagc
tctgccaggacttccttctctgccagtcctcaccgctccacagggaccactgcgagctca
gattctcaggggaagacggacacctcgggaggcgtgaatcctactgcagcgtgtctgtca
gagccgaagacctccagcgggagcagtcctcctcaggaacagaggagaccaggctcaccc
ctccatgatgagaactccaagaatctccaattgcaggagcattcgactgcgaatgagggc
agtgtggacttgtccatggacagggataacagcatgtccatgccgtcgccccccaagaca
tccttctctgccagtcctcatcgctccacagggaccagtgccagctcagattctcaagga
aagatggacacgtcagtaaacacgggtcctgctgcagcttgtccttcagagacgaaaata
cccagtcctgcgagtgcagggaagagaccgagctcaccgctgaatgatgagcaggccaag
aagctcagattagaggaggattctacctcagaatcggtggaccaggctgctgaattttct
caggctagcgatttcaccgctttagacggagaggtgaaaatggagaccgaggcagcggag
tcggatgcagaagggaagataccaccgtctcggaaaacgtccagtactgatctatctgat
gttcctcttcctccggctaaccccatccaagtggtgaaaaactccataaagctgagactg
agtagatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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