KEGG   Ipomoea nil (Japanese morning glory): 109187539
Entry
109187539         CDS       T04663                                 
Name
(RefSeq) uncharacterized LOC109187539
  KO
K03504  DNA polymerase delta subunit 3
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03030  DNA replication
ini03410  Base excision repair
ini03420  Nucleotide excision repair
ini03430  Mismatch repair
ini03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109187539
   03410 Base excision repair
    109187539
   03420 Nucleotide excision repair
    109187539
   03430 Mismatch repair
    109187539
   03440 Homologous recombination
    109187539
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ini01009]
    109187539
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ini03032]
    109187539
   03400 DNA repair and recombination proteins [BR:ini03400]
    109187539
Protein phosphatases and associated proteins [BR:ini01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109187539
DNA replication proteins [BR:ini03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    109187539
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      109187539
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     109187539
SSDB
Motif
Pfam: CDC27
Other DBs
NCBI-GeneID: 109187539
NCBI-ProteinID: XP_019193308
Position
Un
AA seq 500 aa
MAEIETLGILDEIQSLVSDKLQVVSYKWLSQNFLVSSNAAKSLLQEFVEKHGNGVEVVYS
LSGWLKNNPSAYHVQLVSSPKLAEAKQEFNENCSIQVYSVQACIPKDPAALWNAEFVQAE
ELFKQPPVDNCFWDNRFCGVSNSSVKRNAEGSSAITGAPPAKSAGALGVSKSKLTSQSVA
MQQPQQKKVQQGDPRTNMHSPSMVNDVKNEIPEARVSNLAIDKEKITQPLAKKKKVQTDK
TSAGNGGALANMWGRATAKSKADCISTETNNAIPNSADAQICAREEVEDGNSNEDGEDVN
IKRSNGKGSRKRRVVFDSSDEEGEDAVNLASPDPPKTRTSMVKQNSNAPELEKALHFEEN
EKTDMQLKGESLANMESKISSSDILGHGPSNDANTGVKMTDDAPKSPQRKKVLKTRIDER
GREVTEVVWEGEEVTKPDANLTKKAENKVANDAVERPPAPKKPNAIGSNAPSNQAAKVGN
KKGGNKDPKQGNILSFFKRV
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggccgaaatcgaaacgctaggcatcctcgatgagattcagtcccttgtttctgacaag
cttcaagtggtgtcctacaagtggttgagtcagaattttttggtgtcttcaaatgctgca
aagagtctgcttcaggagtttgttgagaagcatggcaacggtgtagaagttgtttatagc
ttgtctggctggttgaagaataatccttcagcctaccatgtgcagcttgtctcaagtcct
aaacttgcagaagccaaacaagaattcaatgaaaattgctcgattcaggtctacagtgta
caagcttgcatcccaaaggatccagcagccctttggaatgctgaatttgtccaagctgag
gagctctttaagcagcctccagttgataattgtttctgggataacaggttttgtggagtt
tcaaattcctctgttaagaggaacgctgagggatcatctgcaatcactggtgcccctccg
gcaaaaagtgcaggggcattaggggtttcaaaaagtaaactcacaagccagagtgtagct
atgcaacaacctcaacagaaaaaggttcaacagggagaccctagaaccaatatgcattcc
ccctctatggttaatgatgtcaagaatgaaatccctgaggctagagttagtaacctagct
atagataaagagaagatcactcaacctctggcaaagaagaagaaggttcagactgacaaa
acatctgctgggaatggaggtgcattggctaatatgtggggtcgtgcaaccgcaaagtca
aaagctgactgcatctcaacagaaactaacaacgccatacccaattcagctgatgctcaa
atatgtgctcgtgaagaggtagaagatggaaacagcaatgaagatggtgaagatgtcaac
attaagagatctaatggtaaaggaagccgaaagaggagagttgtttttgattcctcagat
gaggaaggggaagatgcagtgaacctagcatcaccagatcctccaaaaactagaacttct
atggtaaaacaaaattcgaatgctcctgagctggagaaggccttacattttgaggaaaat
gagaaaactgatatgcaattgaagggagaatctttagctaacatggaatctaagatttcc
tcgtcggatatattgggccatggtccaagtaatgatgcaaatacaggggttaaaatgact
gatgatgctccaaaatcaccccaaagaaagaaagtattaaagacacgaatcgatgagcgt
ggaagagaagttactgaggttgtttgggagggtgaggaggtgacgaaacctgatgctaat
ctgacaaagaaagcagaaaacaaagtagccaatgatgcagttgaaagaccacctgcacct
aagaagccaaatgcgattggaagcaatgctccatcaaaccaagcagccaaagtcggaaat
aagaagggtgggaacaaagaccctaagcaagggaatattctctcattcttcaaaagggtt
taa

  All links  
Gene (7)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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