KEGG   Ictalurus punctatus (channel catfish): 108260450
Entry
108260450         CDS       T04658                                 
Symbol
zgc:55461
Name
(RefSeq) beta-tubulin family protein
  KO
K07375  tubulin beta
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04145  Phagocytosis
ipu04517  IgSF CAM signaling
ipu04540  Gap junction
ipu04814  Motor proteins
ipu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    108260450 (zgc:55461)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    108260450 (zgc:55461)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    108260450 (zgc:55461)
  09142 Cell motility
   04814 Motor proteins
    108260450 (zgc:55461)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108260450 (zgc:55461)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ipu03036]
    108260450 (zgc:55461)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ipu04812]
    108260450 (zgc:55461)
   04147 Exosome [BR:ipu04147]
    108260450 (zgc:55461)
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     108260450 (zgc:55461)
Cytoskeleton proteins [BR:ipu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    108260450 (zgc:55461)
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108260450 (zgc:55461)
  Exosomal proteins of colorectal cancer cells
   108260450 (zgc:55461)
  Exosomal proteins of bladder cancer cells
   108260450 (zgc:55461)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 108260450
NCBI-ProteinID: XP_053533162
Ensembl: ENSIPUG00000007738
UniProt: A0A9F7TH98
Position
28:complement(10093229..10271277)
AA seq 461 aa
MSFPQGRECVWETLLKMREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL
ERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKG
HYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM
NTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGD
LNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL
TVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEW
IPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD
EMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEAEEELA
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgtctttcccacaaggacgagagtgtgtttgggaaacgcttctcaaaatgagagaaatc
gttcacctgcaagctggtcagtgtgggaatcaaattggtgcaaaattttgggaggtgatc
agtgatgaacacggaatcgacccgaccggtacctaccacggtgacagcgacctgcagctg
gagcggattaacgtgtattacaacgaagccactggtggaaagtatgttccccgggctgta
ctggtggacttggagccagggaccatggactctgtaagatctggtccttttggccaagtg
ttcagaccagacaacttcgtgtttggtcagagtggggctggaaacaactgggccaaaggc
cattatactgaaggtgctgagctggtggactcggtgctggatgttgtgcgtaaggaggct
gagagctgtgactgcctacagggcttccagctcacccactccttgggtgggggcaccgga
tcaggcatgggcacactgctcatcagtaagatccgtgaggagtatcccgaccgcatcatg
aacacgttcagtgttgtgccgtctcctaaagtctctgacactgtggtggaaccctacaac
gccactctgtctgtgcaccaactggtggagaacactgacgagacatactgcattgacaat
gaagcactttatgacatctgtttccgcactttaaagctcacaactcccacttatggcgat
ctcaaccatcttgtttctgccaccatgagtggtgtaaccacctgcctccgttttcctggg
cagctcaatgctgacctgcgaaaactggctgtcaatatggtgcccttccctcgtctgcac
ttctttatgcctggttttgccccactcaccagcagggggagccagcagtaccgtgcactc
accgtgcctgaactaacacagcagatgtttgatgctaagaatatgatggcggcgtgtgat
ccacgccatggccgctacctgactgtggctgctgtcttccggggccgcatgtctatgaaa
gaggtggatgagcagatgctcaatgtgcaaaacaaaaacagcagctattttgtggaatgg
atccccaacaatgtcaaaacagctgtatgtgacatcccaccaagagggcttaagatggct
gccaccttcattggcaacagcacagccatccaggagctgttcaagcgcatctcagagcag
ttcacagccatgttcaggagaaaggccttcctgcattggtacacaggagaaggaatggat
gagatggagttcactgaggcagagagcaacatgaatgaccttgtgtcagagtaccagcag
taccaggatgccacagctgaagaggagggtgagtttgaggaagaggcagaagaggaattg
gcataa

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Gene (1294)   
   RefGene (1290)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (1308)   

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