KEGG   Ictalurus punctatus (channel catfish): 108272651
Entry
108272651         CDS       T04658                                 
Name
(RefSeq) tubulin beta-1 chain isoform X1
  KO
K07375  tubulin beta
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04145  Phagocytosis
ipu04517  IgSF CAM signaling
ipu04540  Gap junction
ipu04814  Motor proteins
ipu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    108272651
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    108272651
  09144 Cellular community - eukaryotes
   04540 Gap junction
    108272651
  09142 Cell motility
   04814 Motor proteins
    108272651
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108272651
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ipu03036]
    108272651
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ipu04812]
    108272651
   04147 Exosome [BR:ipu04147]
    108272651
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     108272651
Cytoskeleton proteins [BR:ipu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    108272651
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108272651
  Exosomal proteins of colorectal cancer cells
   108272651
  Exosomal proteins of bladder cancer cells
   108272651
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 108272651
NCBI-ProteinID: XP_017336691
Ensembl: ENSIPUG00000010950
UniProt: A0A2D0S2M2 W5UBT9
Position
12:complement(6826498..6834128)
AA seq 465 aa
MREIVHLQIGQCGNQISSKFWEVISDEHGISAVGTYEGDMDVQLERVNVYFNEANGGKYV
PRALLVDLEPGTLDSVRGSHIGELFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVIDRV
RNEAENCDCLQGFQFVHSLGGGTGSGMGTLLINKIREEFPDRIMNSFSVMPSPKVSDTVV
EPYNATLSIHQLIENTDETFCLDNEALYDICFRTLKLTMPTYGDLNHLVSMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMSGFAPLTPRGSQQYQALSVPELTQQMFDARNMM
TACDPRHGRYLTAAGVFRGRMSTKEVEEQMLIVQQKNSNYFVEWIPHNVKVAVCDIPPRG
LKMASTFIGNNTAIQEIFRRVGEQFAMMFRRKAFLHWYTGEGMDEMEFTEAESNLNDLVS
EYQQYQDATAELDWEPEEEMTEVEGNASTVVNTRVDLKNETMSED
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgcgcgagattgttcatcttcagatcggacagtgtgggaatcagatcagttcaaagttt
tgggaagttatcagtgacgaacatggtatcagtgcagtgggaacctatgagggggacatg
gacgttcagctggagagagtcaatgtctactttaatgaagcaaatggtgggaagtatgtc
ccccgggcactgttggtggatttggaaccaggaacattagacagtgtgaggggaagtcac
attggagaactcttcagacctgacaacttcatacatgggaattctggagctggaaataac
tgggcaaaaggtcactacacagagggggcagagttggttgagcaagtaatagaccgtgtc
cgtaatgaagctgaaaactgtgactgcctgcagggcttccagtttgttcactctttgggt
ggtggtactggctcaggcatgggcaccctgctcatcaacaaaatccgtgaagagttccca
gacagaatcatgaatagctttagtgtcatgccctctcctaaagtctcggacacagtagtg
gagccatataatgccacactgtccattcaccaactgattgagaatacagacgagacattc
tgccttgacaacgaagctctttatgatatctgtttccgtacactcaagctcaccatgcca
acatatggagatctcaatcaccttgtgtctatgactatgagtggggtcacaacctctctg
cgctttcctggtcagctgaatgctgatctccgcaagctggctgtcaacatggtgcccttt
cctcgccttcacttctttatgtctggctttgctcccctcacaccacgaggaagtcagcaa
taccaggccctctctgttcctgaactcacccagcagatgtttgatgcccgaaacatgatg
acagcatgtgacccccggcatggccgctacctcactgctgcaggagttttccgtggtcgc
atgtccactaaagaggtagaagaacaaatgctcattgttcagcagaagaacagcaactac
tttgtggaatggattccccacaatgttaaagtggctgtttgtgacatcccaccacgtggc
cttaaaatggcatctaccttcattggaaacaatacagccatccaagagattttccggcga
gtcggggagcagtttgccatgatgttccgccgcaaggcttttctgcactggtacacagga
gagggcatggatgagatggagttcacagaagctgagagcaacctgaatgatcttgtgtct
gagtatcagcaatatcaggatgccacagctgagctggattgggagccagaggaagaaatg
acagaggtagagggaaatgcgtcgacagtagtaaataccagagtcgacctaaaaaatgag
accatgagtgaagattag

  All links  
Gene (54)   
   RefGene (50)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (10)   
   RefSeq(nuc) (4)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (75)   

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