KEGG   Ictalurus punctatus (channel catfish): 108276639
Entry
108276639         CDS       T04658                                 
Name
(RefSeq) caldesmon isoform X1
  KO
K12484  Rab11 family-interacting protein 1/2/5
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108276639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108276639
Membrane trafficking [BR:ipu04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    108276639
SSDB
Motif
Pfam: C2 RBD-FIP
Other DBs
NCBI-GeneID: 108276639
NCBI-ProteinID: XP_017343940
UniProt: A0A2D0SNT0
Position
16:complement(21290807..21311626)
AA seq 1231 aa
MSLADQSLQFFPVSARVSVLRARGLRIKGKDGTNDAYATLQAGRETFRTPVAEKHAEPVW
GGDDAAFIFTEQDGVPLQVRVLHRVPLGADKVLGLTVVNVHELRQDSARENPQWFKLLNK
TGKADKERGEVLLDIQFLKSSMSVSMIDLSDKSHSRLGKFKDKLRGKKKEGLSDSASAIL
PSVSQVLTDSEEELDRETEGESTKKKKNKLKSLFVPKSSMKRNSMSQSMSSLGTLPDKNS
SISSSTSSGLNVESEGKKKKKFTFLTHKRNGSTDSKTSTHNNSTLGSTNQNPPSPIDICI
NGSHVYREETQSEEVQEMEEEEGENEEEEERWRREEEERERLEEERKRKEKEEQRRKEEE
EKESIRVEREKEEQRRRMAEEKERIRMEREKEEERRRMGEREKERIRMEREKEEQRRLEE
EEKERMRIEREKEEQKRRMEEEEKERIRVEREKEEQMRKMAEEKERIRIEREKEEERRRM
EEREKERIRMEREKEEQRRLEEEEKERMRIEREKEEQKRRMEEEEKERIRMEREKEEQRR
RIEQEEKERKRMEKEEQQRKLEEGERMRMKREKEEQMRKLEEGGKRKEERGAEELRRKME
EGNDRKKAEEEEKMRIAEEGRVKEEKKRAERKRMMEEEEKQKEEKRIAMERRLADEKKAR
EEEERRIAEEKEKQHKEEERVREEKERKRTEMEMKRKEEEQERRKMEMEDKKKKEKQMRE
EQERLRKEETVFEESVISQSTDFPRSARISMKPSMSVSATVSQLTMTNTNPFLDDDLDAS
ISENTSVEEATAKKGRAPLPIQLTGPDVCSRAVSKQHSNLKEVSKRPAPQPPGTLNMTRE
VTVKENIDQAGLGQGAKKTPERHHESKVLSVTQDVTQVNTNPFTCDGPVAIKHKSPAPKP
RSGTSVSEDMPRNGGKNLTESTAHLEEKASASNIKGNPPNWKLLGASNDITVEYVKSDLT
DDLSRREHHLEDAVEPESAKPNSPCVSQDLCPEPLVSPTDGLPSMERSQKKSRAPLPPVK
PKRTEDPSTPHQQPSLPNKTNLEQAQENHSNKKDQDNTLVSSIEIAAISTPSSTVSSSVF
TPLAEKSQVMKPCSTESVETGSGSGSMTLPWAKMVPSDAGEVREQVAPTSVIRQHAVKPL
SAAENRPETHESRVTDNIQPKTKAAEAVTKGPYSQLTQTELISLALRQQEQLSKRDARIQ
ELEQYIDDLLVRVMDEKPSILMSLNTKNKSI
NT seq 3696 nt   +upstreamnt  +downstreamnt
atgtctttggcagatcagagtctgcagtttttcccggtgagcgcgcgggtgtcggttctc
cgggcacgaggcctccggatcaaagggaaggatggcaccaacgatgcgtacgcgacgctg
caagcgggtcgcgagacgttccgcacaccggtggcggagaagcacgcggagccggtgtgg
ggcggggacgatgccgccttcattttcactgaacaggacggcgtcccgctgcaggtgcgc
gtgctacaccgcgtcccgctcggagcggacaaagtactcggactgaccgtcgttaatgtg
cacgagctccggcaggacagcgcgcgcgagaacccacagtggtttaagctgttaaataag
acggggaaagccgataaggagcgcggtgaggttctgctggacattcagttcctgaagagc
agcatgagtgtcagcatgattgacctctctgacaaatcacactcgcgccttggaaagttc
aaggacaaactgcggggcaaaaagaaagaagggctgagcgactcagcctctgcgattttg
ccttcggtcagccaggtgttgacggacagtgaggaagaactggacagagagacggaggga
gagtcgacaaaaaagaagaagaacaaactaaagtctctttttgttcctaaatccagcatg
aagcgcaactccatgtctcaatccatgtcctcattagggacacttcctgataaaaactcg
tccatcagctcgagcacgtcctcaggcctcaatgtggaatcagaagggaagaaaaagaag
aaatttacctttttaacacacaaacggaatggcagcacagacagcaagacatccactcat
aataactccacccttggctcgaccaatcagaatcctccatcaccgattgatatttgcatt
aatggtagtcatgtttacagagaagaaacccaaagtgaagaagtgcaggaaatggaggaa
gaggagggagagaatgaggaagaagaggagagatggcgaagagaggaagaagaacgggaa
cgactggaggaggagagaaaaagaaaagagaaagaagagcaaaggagaaaggaggaggaa
gaaaaagagagtatacgggtggagagagagaaggaagaacaaaggagaaggatggcagag
gagaaagaacggataaggatggaaagagagaaggaagaagaaaggagaaggatgggggag
agagagaaagagaggatacgaatggagagagagaaggaagaacaaagaaggcttgaggag
gaagaaaaagaaaggatgaggattgaaagagagaaggaagaacaaaagagaaggatggag
gaggaagaaaaagagaggataagggtggagagagagaaggaggaacaaatgagaaagatg
gcagaggaaaaagaacggataagaattgaaagagagaaggaagaagaaaggagaaggatg
gaggagagagagaaagagaggatacgaatggagagagagaaggaagaacaaagaaggctt
gaggaggaagaaaaagaaaggatgaggattgaaagagagaaggaagaacaaaagagaagg
atggaggaggaagaaaaagagaggataaggatggagagagagaaggaggaacaaaggaga
aggatagagcaggaagaaaaagagagaaagaggatggagaaagaggagcagcagagaaag
ttggaggagggagaaagaatgaggatgaagagagagaaggaagaacagatgagaaagttg
gaggagggaggaaaaagaaaggaagagaggggggcagaagagctgaggagaaagatggag
gaggggaatgacaggaagaaggctgaggaagaagagaagatgaggattgctgaggaggga
agggtgaaggaagagaagaaaagagcggagagaaaacgcatgatggaggaggaagaaaaa
cagaaagaggagaaaaggattgcaatggagagaaggttagcagatgagaaaaaagccagg
gaggaagaagagagaagaatagcagaagagaaggagaaacagcataaagaagaagaacga
gttcgagaggaaaaagagaggaagaggacagagatggagatgaagagaaaggaagaggag
caggaaagaaggaaaatggagatggaggataagaaaaagaaggaaaaacagatgagagaa
gagcaggagagattaagaaaagaagaaacggtatttgaagaaagtgtcatctcacaatcc
actgacttccctcgttcagccagaatctccatgaaaccgagcatgtccgtctctgcaaca
gtttctcaattgactatgacgaacaccaacccctttttggatgacgatttagatgccagc
atttcagaaaacaccagtgttgaagaggcaactgctaaaaaaggacgtgccccattacct
atacagttgactgggccagatgtttgctccagagctgtttctaaacagcattcgaattta
aaagaagtctcaaaacggccagcacctcaaccaccaggtacactgaacatgaccagagaa
gtgacggtcaaagaaaatatagatcaagcaggtctcggtcaaggagcaaagaaaacccct
gagagacatcatgagagcaaagtcttgtcagtcactcaagatgtcacacaagttaatact
aatcctttcacatgtgatggaccagtggctataaaacacaagtccccagcaccaaaacca
agaagtgggacatccgtgtctgaagatatgccaagaaatggtggcaaaaacctaacagaa
agtactgctcaccttgaagaaaaagcaagtgcttctaatatcaaaggtaatccaccaaac
tggaaactgctgggagcctcaaatgatattacagttgaatatgtcaaaagtgaccttact
gatgatctgtcacgaagagaacatcatctggaggatgcagttgagcctgaatctgcaaag
ccaaattctccatgtgttagtcaggatttgtgtccagaacctctggtttcccccactgat
ggactgccaagcatggaaagatcccaaaagaagtctcgagcccctcttcctccagttaaa
cccaaaagaactgaagatccaagcactccacaccagcagccatctcttccaaacaagact
aaccttgaacaagcccaagagaaccatagtaataagaaggaccaagataacacattggtt
tctagtattgaaatagctgcaatcagcactccatcatccacagtttcatcctcagtgttc
acgccacttgctgagaaatcacaggtcatgaaaccttgttctactgagtcggtggagacg
ggttctggttctgggtctatgactttgccatgggctaaaatggtacccagtgatgcaggt
gaagtaagagaacaagttgctcccacctcagtaatcaggcagcatgctgtaaaacccctg
agtgctgcagagaatcggcctgaaactcatgaatctcgagtaactgacaacatacagccc
aaaacaaaggctgcagaagcagtgacgaaaggcccgtattctcagttgacgcagaccgag
ctgatctctctggcgttgcgtcaacaggaacagctttcaaagcgtgatgccaggatccag
gagctggagcaatacatcgatgacctgctggtgcgtgtgatggacgaaaagccaagcatt
ctgatgagcctgaacacaaagaacaaatcaatatga

  All links  
Gene (13)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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