KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961270
Entry
101961270         CDS       T10664                                 
Symbol
Tubb4a
Name
(RefSeq) tubulin beta-4A chain
  KO
K07375  tubulin beta
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04145  Phagocytosis
iti04517  IgSF CAM signaling
iti04540  Gap junction
iti04814  Motor proteins
iti05010  Alzheimer disease
iti05012  Parkinson disease
iti05014  Amyotrophic lateral sclerosis
iti05016  Huntington disease
iti05020  Prion disease
iti05022  Pathways of neurodegeneration - multiple diseases
iti05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:iti00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    101961270 (Tubb4a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    101961270 (Tubb4a)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    101961270 (Tubb4a)
  09142 Cell motility
   04814 Motor proteins
    101961270 (Tubb4a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    101961270 (Tubb4a)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    101961270 (Tubb4a)
   05012 Parkinson disease
    101961270 (Tubb4a)
   05014 Amyotrophic lateral sclerosis
    101961270 (Tubb4a)
   05016 Huntington disease
    101961270 (Tubb4a)
   05020 Prion disease
    101961270 (Tubb4a)
   05022 Pathways of neurodegeneration - multiple diseases
    101961270 (Tubb4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:iti03036]
    101961270 (Tubb4a)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:iti04812]
    101961270 (Tubb4a)
   04147 Exosome [BR:iti04147]
    101961270 (Tubb4a)
Chromosome and associated proteins [BR:iti03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     101961270 (Tubb4a)
Cytoskeleton proteins [BR:iti04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    101961270 (Tubb4a)
Exosome [BR:iti04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   101961270 (Tubb4a)
  Exosomal proteins of colorectal cancer cells
   101961270 (Tubb4a)
  Exosomal proteins of bladder cancer cells
   101961270 (Tubb4a)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 101961270
NCBI-ProteinID: XP_005332148
UniProt: I3NB70
Position
Unknown
AA seq 444 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEGEFEEEAEEEVA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgcgggagatcgtgcacctgcaagccggccagtgcggcaaccagatcggggccaagttt
tgggaggtgatcagtgatgaacatggcatcgaccccaccggcacataccatggggacagt
gacctgcaactggaaaggatcaatgtctactacaatgaggccacaggagggaactacgtg
ccccgagccgtgctggtggacctggagcctggcaccatggactccgtccgctcgggcccc
tttggccagatatttcggccagacaactttgtgtttggccagtcgggagccggcaacaac
tgggccaagggccactacaccgagggcgcggagctggtggacgccgtcctggacgtggtg
cgcaaggaggcggagagctgtgactgcctgcagggcttccagctgacccactcgctgggc
ggcggcacaggctcaggcatgggcacgctgctcatcagcaagatccgcgaggagttcccg
gaccgcatcatgaacaccttcagcgtggtgccctcgcccaaggtgtcggacacggtggtg
gagccctacaacgccacgctgtcggtgcaccagctggtggagaacacggacgagacctac
tgcatcgacaacgaggcgctctacgacatctgcttccgcaccctcaagctgaccacgccc
acctacggggacctcaaccacctggtgtcggccaccatgagcggggtcaccacctgcctg
cgcttcccgggccagctcaacgccgacctgcgcaagctggccgtgaacatggtgcccttc
ccgcgcctgcacttcttcatgccgggcttcgcgccgctgaccagccggggcagccagcag
taccgcgcgctgaccgtgcccgagctcacccagcagatgttcgacgccaagaacatgatg
gccgcgtgcgacccgcgccacggccgctacctgaccgtggccgccgtgttccggggccgc
atgtccatgaaggaagtggacgagcagatgctgagcgtccagagcaagaacagcagctac
ttcgtggagtggatccccaacaacgtgaagacggccgtgtgcgacatcccgccccgcggc
ctcaagatggcggccaccttcatcggcaacagcacggccatccaggagctgttcaagcgc
atctcggagcagttcacggccatgttccggcgcaaggccttcctgcactggtacacgggc
gagggcatggacgagatggagttcacggaggccgagagcaacatgaacgacctggtgtcc
gagtaccagcagtaccaggacgccacggccgaggagggcgagttcgaggaggaggcggag
gaggaagtggcctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (10)   

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