KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101969625
Entry
101969625         CDS       T10664                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DET1 homolog
  KO
K10571  de-etiolated-1
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101969625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:iti04121]
    101969625
Ubiquitin system [BR:iti04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     101969625
SSDB
Motif
Pfam: Det1
Other DBs
NCBI-GeneID: 101969625
NCBI-ProteinID: XP_040126473
Position
Unknown
AA seq 486 aa
MDHHVSTIKPRRIQNQNVIHRLKRRRISSGKAGPHWHQVGVFHQNVFPNFTVANVEKPPC
FLRTFSPDGCYFIAFPSDQTSLEIYEYQGCQAAEDLLQGYEGEILSNGNDQRSVNIRGRL
FERFFVLLHITNVAANGEHLNRESSLFTDNCRXVIVGSAAYLPDEPHPPFYEVYRNSESV
TPNPRSPLEDYSLHIIDLHTGRLCDTRTFKCDKVXLSHNQGLYLYKNILAILSVQQQTIH
VFQVTPEGTFIDVRTIGRFCYEDDLFTVSAVFPEVQQDSQTGMANPFRDPFINSLKHRLL
VYLWRRAEQDGSAMAKRRFFQYFDQLRQLRMWKMQLLDENHLFIKYTSEDVVTLRVTDPS
QASLFVVYNMVTTEVIAVFENTSDELLELFENFCDLFHNATLHSEVQFPYSASSNNFARQ
IQRRFKDTIINAKYGGHIEAVRRQLGQLPISAQSYSGSPYLDLSLFSYDDKWVSVMERPK
TCGDHP
NT seq 1458 nt   +upstreamnt  +downstreamnt
atggatcatcatgtttccactattaaacctcgaagaatccaaaaccaaaatgtcattcac
cgattgaaacggcggcggatcagttcaggcaaggcaggtcctcattggcaccaggttgga
gtgttccaccagaatgtcttccctaactttacagttgccaacgttgaaaaacctccttgt
ttcttgcgtacattctcacctgatggatgctactttattgcttttccttctgaccagaca
tctcttgaaatttatgagtaccagggctgccaagcagcagaggacctattgcagggatat
gagggggagatcctatccaatggcaatgaccagaggtcagtcaacatccggggcaggctt
tttgaacgatttttcgtcctgctgcacattacaaatgtagcagccaatggtgagcacctg
aaccgggagagtagcctcttcactgataattgccgatgagtgatcgtgggctctgctgcc
tacctcccggatgagcctcaccctcctttctatgaagtatatcggaacagtgaatcagta
accccaaatccacggtcccctctagaggactattccctccacatcattgaccttcacact
ggccgcttatgtgatacgcgcacattcaagtgtgataaagtgngtctgtcacacaatcaa
gggctgtacttgtataaaaacatcctggccatcttgtctgtgcagcagcagaccatccat
gtcttccaggtgactcctgaaggcacattcattgatgtgcggaccattggccgcttctgc
tatgaggatgacctgtttactgtgtcggctgttttccctgaagtacagcaggacagtcag
acaggcatggccaatccctttagggatcctttcatcaactccctaaaacaccggttgctg
gtatacctgtggcgccgggcagaacaggatggtagtgcaatggccaagaggcgcttcttc
cagtattttgaccagctgcggcagctgcgtatgtggaaaatgcagcttttggatgaaaac
catctgtttatcaagtataccagtgaggatgtagtgacactgcgagtcactgatccatct
caggcatctttgtttgtagtgtacaatatggtgacaactgaagtgattgctgtgtttgag
aatacatcggatgaacttttggaactctttgagaacttctgtgatctcttccataatgct
accttgcacagtgaagtccaatttccctactcagcctccagcaacaattttgcaaggcag
atccagcgccggttcaaagacacgattataaatgccaagtacggaggccacatagaggct
gtgcgccggcagctgggtcagctccccatcagtgcacagtcctacagtggcagcccctac
ctggatttgtctctcttcagctacgatgacaaatgggtgtcagtcatggagcgacccaag
acttgtggagatcacccc

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (5)   

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