KEGG   Ipomoea triloba (trilobed morning glory): 116004821
Entry
116004821         CDS       T07384                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
itr  Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:itr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:itr03041]
    116004821
Spliceosome [BR:itr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    116004821
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    116004821
SSDB
Motif
Pfam: MA3 MIF4G SR-25 HEAT_5MP1_2
Other DBs
NCBI-GeneID: 116004821
NCBI-ProteinID: XP_031100853
Position
14:complement(5726810..5737120)
AA seq 561 aa
MVILLPMKGDEELSISHKAHMLTFEYQRMTWDALRKSINGLVNKVNVTNIKNIIPELFAE
NLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTRFPGVGNLLLRRIILQLQRAYKRN
DKLQLLAAVKFIAHLVNQEVIHELIALELLAVLLENPSDDSVEVAVGFVTECGSMLQDLT
PRGLHGIFERFRGILHEGEIDKRVQFLIEGLFALRKAKFQGYPAVRPELNLVEQVDQLTH
EISFQDTIDPEIALDIFKPDSNFLENEKKYEELKTAILGEESEEEGNSHAESGDDDDDEE
EEEEEDEEQMKLKDETETNLVNLRRTIYLTIMSTVGFDEAGHKLLKIKLEAGQEMELCIM
LLECCSQERTYLRNYGLWGQRFCMINKVYQENFEKCFVQQYSMIHRLETNKLRNVALFFA
HLLATDALHWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHFGIRLLNDRLNDPTMQESF
DSIFPKDNPKNTRFAINFFTQIGLGGITENLRAYLKNVQRLIMQQKKSVSESSSGSSSDE
SESESSSSSSEEDTRRKRMRH
NT seq 1686 nt   +upstreamnt  +downstreamnt
atggtcattttgctccctatgaaaggggatgaggaattaagcatatctcataaagcccat
atgcttacgtttgaataccaaagaatgacttgggatgctcttaggaagagtataaatggg
ttggtgaacaaagtgaatgtaactaatataaagaacataattccggaattgtttgctgag
aacctgattcgtggaagaggtctgttttgccggtcctgtatgaagtcccaaatggcttct
cctggttttacagatgtatttgcagcattagttgccgttgtgaacactaggtttccaggg
gtaggtaatcttctcttgaggagaattatattacaactccaaagagcatacaaacgaaac
gataagctccagttattggcagcagttaaatttattgctcacctcgtgaaccaggaagta
atccatgagctaattgctctggaattacttgctgttttactggaaaatccatcagatgac
agtgttgaagttgctgttggttttgttactgagtgtggatccatgctgcaagacctcacc
ccccgtgggttgcatggtatctttgagcgctttcgtgggatactccacgaaggagagata
gataaaagggttcagttcttaatcgaaggcctctttgcattgcgtaaagcaaagtttcag
gggtaccctgcggtacgtccagagcttaatctagtagagcaagtagatcagttgacccat
gaaatatctttccaagatactatagatcctgaaattgctcttgatatttttaagccagat
tctaacttcttagagaatgaaaaaaagtatgaagaattgaaaaccgcaatcctaggtgag
gaatctgaggaagaagggaattctcatgctgagtctggggatgatgatgatgatgaagaa
gaagaagaagaagaggatgaagagcaaatgaaattaaaagacgagactgaaacaaactta
gtcaaccttaggagaactatctatctaacaattatgtccactgttggctttgatgaagca
ggtcataagctgttgaaaattaaacttgaggctggtcaagagatggagttatgcataatg
cttttagagtgctgcagtcaggagagaacatacctccgcaactatggtctttgggggcag
cgtttttgcatgatcaacaaagtttaccaggagaactttgagaagtgttttgtgcaacaa
tactcgatgattcaccgtctggaaacaaataaactgcgaaatgttgccttgttttttgca
catctgcttgcaactgatgcattgcattggcatgttctggcttacatacggcttacagaa
gaagacactacctcttcttctcgcatatttatcaagattctctttcaggaattgtccgaa
cactttgggattcgcttgttgaatgaccgtcttaatgacccaacaatgcaggaatcgttt
gactcaatatttccaaaggataatccaaaaaatactcggtttgcaatcaatttcttcaca
caaatcggtctgggtgggattacagaaaatctcagggcatatttgaagaatgtgcagcgc
ctaataatgcaacaaaagaaatctgtttcagaatcgagttctggctcctcctccgatgag
tccgaatctgaatcatctagctctagctctgaggaagatacacgaaggaaacggatgaga
cattag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (8)   

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