KEGG   Ipomoea triloba (trilobed morning glory): 116004822
Entry
116004822         CDS       T07384                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
itr  Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:itr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:itr03041]
    116004822
Spliceosome [BR:itr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    116004822
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    116004822
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2
Other DBs
NCBI-GeneID: 116004822
NCBI-ProteinID: XP_031100854
Position
14:complement(5742243..5744204)
AA seq 625 aa
MDAENYRRDEEDHYENYRVSGREEERRREKERDRRVNNAGEENHKNEDSKVSKQEGNMIT
QTGRRGGVYIPPFKLARMMKEIQDKSSVEYQRITWDALRKSINGLVNKVNNPNIKNIIPE
LFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNIRFPVVGNLLLRRIILQLQRA
YKRNDKPQLLAAVKFIAHLVNQEVIHELIALELLAVLLENPSDDSVEVAVGFVTECGSML
QDLTPRGLHGIFERFRGILHEGEIDKRVQFLIEGLFALRKAKFQGYPAVRPELNLVEQVD
QLTHEISFQDTIDPEIALDIFKPDSNFLENEKKYEELKTAILGEESEEEGNSHAESGDDD
DDEEEEEEEDEEQMKLKDETETNLVNLRRTIYLTIMSTVGFDEAGHKLLKIKLEAGQEME
LCIMLLECCSQERTYLRNYGLWGQRFCMINKVYQENFEKCFVQQYSMIHRLETNKLRNVA
LFFAHLLATDALHWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHFGIRLLNDRLNDPTM
QESFDSIFPKDNPKNTRFAINFFTQIGLGGITENLRAYLKNVQRLIMQQKKSVSESSSGS
SCDESESESSSSSSEEDTRRKRMRH
NT seq 1878 nt   +upstreamnt  +downstreamnt
atggatgcagagaattaccgcagagatgaggaggaccactatgaaaattatagggtttct
ggaagagaagaagaacgtaggagggagaaggaaagagataggagggttaataacgcaggc
gaagaaaatcataagaatgaggattctaaagtgtcaaagcaagaagggaatatgattaca
cagacgggaaggaggggaggagtttatattccccctttcaagttggcgaggatgatgaag
gagatacaggataaaagctcagttgaataccaaagaattacttgggatgctcttaggaag
agtataaatgggttggtgaacaaagtgaataaccctaatataaagaacataattccggaa
ttgtttgctgagaacctgattcgtggaagaggtctgttttgccggtcctgtatgaagtcc
caaatggcttctcctggttttacagatgtatttgcagcattagttgccgttgtgaacatt
aggtttccagtggtaggtaatcttctcttgaggagaattatattacaactccaaagagca
tacaaacgaaacgataagccccagttattggcagcagttaaatttatagctcacctcgtg
aaccaggaagtaatccatgagctaattgctctggaattacttgctgttttactggaaaat
ccatcagatgacagtgttgaagttgctgttggttttgttactgagtgtggatccatgctg
caagacctcaccccccgtgggttgcatggtatctttgagcgctttcgtgggatactccac
gaaggagagatagataaaagggttcagttcttaatcgaaggcctctttgcattgcgtaaa
gcaaagtttcaggggtaccctgcggtacgtccagagcttaatctagtagagcaagtagat
cagttgacccatgaaatatctttccaagatactatagatcctgaaattgctcttgatatt
tttaagccagattctaacttcttagagaatgaaaaaaagtatgaagaattgaaaaccgca
atcctaggtgaggaatctgaggaagaagggaattctcatgctgagtctggggatgatgat
gatgatgaagaagaagaagaagaagaggatgaagagcaaatgaaattaaaagacgagact
gaaacaaacttagtcaaccttaggagaactatctatctaacaattatgtccactgttggc
tttgatgaagcaggtcataagctgttgaaaattaaacttgaggctggtcaagagatggag
ttatgcataatgcttttagagtgctgcagtcaggagagaacatacctccgcaactatggt
ctttgggggcagcgtttttgcatgatcaacaaagtttaccaggagaactttgagaagtgt
tttgtgcaacaatactcgatgattcaccgtctggaaacaaataaactgcgaaatgttgcc
ttgttttttgcacatctgcttgcaactgatgcattgcattggcatgttctggcttacata
cggcttacagaagaagacactacctcttcttctcgcatatttatcaagattctctttcag
gaattgtccgaacactttgggattcgcttgttgaatgaccgtcttaatgacccaacaatg
caggaatcgtttgactcaatatttccaaaggataatccaaaaaatactcggtttgcaatc
aatttcttcacacaaatcggtctgggtgggattacagaaaatctcagggcatatttgaag
aatgtgcagcgcctaataatgcaacaaaagaaatctgtttcagaatcgagttctggctcc
tcctgcgatgagtccgaatctgaatcatctagctctagctctgaggaagatacacgaagg
aaacggatgagacattag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (7)   

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