KEGG   Huiozyma naganishii: KNAG_0K02020
Entry
KNAG_0K02020      CDS       T08174                                 
Symbol
KNAG0K02020
Name
(RefSeq) hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
kng  Huiozyma naganishii
Pathway
kng03020  RNA polymerase
kng03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:kng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    KNAG_0K02020 (KNAG0K02020)
  09124 Replication and repair
   03420 Nucleotide excision repair
    KNAG_0K02020 (KNAG0K02020)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kng03021]
    KNAG_0K02020 (KNAG0K02020)
   03400 DNA repair and recombination proteins [BR:kng03400]
    KNAG_0K02020 (KNAG0K02020)
Transcription machinery [BR:kng03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     KNAG_0K02020 (KNAG0K02020)
  RNA polymerase III system
   RNA polymerase III
     KNAG_0K02020 (KNAG0K02020)
  RNA polymerase I system
   RNA polymerase I
     KNAG_0K02020 (KNAG0K02020)
DNA repair and recombination proteins [BR:kng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      KNAG_0K02020 (KNAG0K02020)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat Sof1 SH3_2
Other DBs
NCBI-GeneID: 34528333
NCBI-ProteinID: XP_022466811
UniProt: J7SAY3
Position
11:412706..413353
AA seq 215 aa
MDQENERNVRRLWRTFRTIKEMVKDRGYFITQEEVELSLEDFKVKYCDSMGRPQRKMMSF
QANPMEEAIAKFPDMGSLWVEFCDEPSVGVKTMKNFVIHIQEKNYQIGIFVYQNNVTPSA
MKLVPSIPPATIETFHETSLVVNITHHELVPKHIKLSTDEKKELLKRYRLKESQLPRIQR
ADPVALYLGLKRGEVVKIIRKSETSGRYASYRICM
NT seq 648 nt   +upstreamnt  +downstreamnt
atggatcaggaaaacgagagaaacgtgagaaggctgtggagaacgttccggaccatcaag
gagatggtcaaggacagagggtactttatcacgcaggaggaggtggagttgtccctagag
gatttcaaagtgaagtactgtgactccatgggcagaccacagcgtaaaatgatgtcgttc
caggccaacccgatggaggaggccatcgcaaagtttcctgatatggggtctctgtgggtc
gagttttgcgacgaaccttccgtcggtgtcaaaacgatgaaaaacttcgtcatccacatc
caggagaagaactaccaaatcgggatctttgtctatcagaacaacgtcacgccaagcgcc
atgaagctggtgccctccatacccccagccaccatagaaaccttccatgagacatcgctc
gtcgtcaacatcacgcaccatgagctggtccccaagcatatcaaactgtccacggacgaa
aagaaggaattgttgaaaagatacaggctgaaggagtcccaattgccaagaatccaaagg
gcagacccggtcgcgctgtaccttgggctcaagagaggtgaggtcgtcaagatcatcaga
aagagtgaaacgtccggccgttacgcaagttatagaatctgtatgtga

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