KEGG   Lysobacter antibioticus ATCC 29479: GLA29479_1445
Entry
GLA29479_1445     CDS       T04526                                 
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
laq  Lysobacter antibioticus ATCC 29479
Pathway
laq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:laq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GLA29479_1445 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:laq03019]
    GLA29479_1445 (pcnB)
Enzymes [BR:laq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     GLA29479_1445 (pcnB)
Messenger RNA biogenesis [BR:laq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     GLA29479_1445 (pcnB)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_arg_C PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: ALN62327
UniProt: A0A0S2DV38
Position
complement(1532558..1533898)
AA seq 446 aa
MQADNSSFHTSLRVIPRDQHNVSRKEISPNALRVLYRLRDSGFGAFLVGGAVRDILVGGH
PKDFDVATDATPEQVKGLFRNCRLIGRRFRLAHVVYGREIIEVATFRANIDDGSGDRETD
TGGRLVRDNVYGSIEDDAVRRDFTANALYYAVEDFSVRDYVGGFEDVQNRLMRLIGDPET
RYREDPVRMLRAVRLAAKLGFEIEAATAAPIPHLAPLLADAAPARLFEECLKLFLSGHAV
ESFLGLERFGLLSALLPESAAALKSNRSGALRRMVLEGLKGTDARVANDEPVSPAFLFAL
LLWPAYCRDLMGLQAQGVHTAEAQRRAADRVTLHQLSTIALPRRFSLPMQEIWLLQSRFQ
QRQRKRVFRLLSHPRFRAAFDFLSLRMAASDEHAADVEFWREAQQHPGELLAHQEAHAHL
DDEEGGEDRAPRKRRRRRRGAPTASE
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgcaagccgataactcttcattccatacctcgctgcgcgtgatcccgcgcgaccagcac
aatgtctcgcgcaaggagatcagtccgaacgcgcttcgcgtgctgtatcggctgcgcgac
agcggcttcggcgccttcctggtcggtggcgccgtgcgcgacatcctggtcggcggtcat
cccaaggacttcgacgtcgccaccgacgccacgccggagcaggtcaagggcctgttccgc
aactgccggctgatcggccgccggttccgcctggcgcacgtggtctacggccgcgagatc
atcgaggtcgcgaccttccgcgccaacatcgacgacggcagcggcgaccgcgagaccgac
accggcggccgcctggtccgcgacaacgtctacggcagcatcgaggacgacgcggtccgc
cgcgacttcaccgccaatgcgctgtattacgcggtcgaggatttctcggtgcgcgactac
gtcggcggcttcgaggacgtgcagaaccgcctgatgcgcctgatcggcgatccggaaaca
cgttatcgcgaagacccggtgcggatgctgcgcgccgtgcgcctggcggccaagctcggt
ttcgagatcgaggcggccactgccgcgccgatcccgcatctggcgccgttgctcgccgat
gccgcgccggcgcggttgttcgaggaatgcctcaagctgttcctgtccggccatgcggtc
gaaagcttcctcggcctggagcgtttcggattgctgtcggcgctgttgccggaaagtgcg
gcggccctgaagtccaaccgcagcggcgccctgcgccggatggtgctggaagggctgaag
ggcaccgacgcgcgcgtcgccaacgacgagccggtctcgcccgcgttcctgttcgcgttg
ttgctgtggccggcgtattgccgcgacctgatgggtctgcaggcgcagggcgtgcacacc
gccgaagcgcagcgccgcgccgccgaccgggtcaccttgcaccagttgtcgacgatcgcg
ctgccgcgccgcttctcgctgccgatgcaggagatctggctgctgcagtcgcgtttccag
cagcgtcagcgcaagcgcgtgttccggctgttgtcgcacccgcgtttccgcgccgccttc
gatttcctctcgctgcgcatggccgcatcggacgagcacgccgccgacgtcgagttctgg
cgcgaggcgcagcagcatccgggcgaactgctcgcgcaccaggaggcgcatgcgcacctg
gacgacgaggagggcggcgaggatcgcgccccgcgcaaacgccgtcgccgccgtcgcggc
gcgccgaccgcatcggagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (6)   

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