KEGG   Lycium barbarum (goji berry): 132641679
Entry
132641679         CDS       T09483                                 
Name
(RefSeq) nuclear poly(A) polymerase 1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    132641679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbb03019]
    132641679
Enzymes [BR:lbb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     132641679
Messenger RNA biogenesis [BR:lbb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     132641679
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2
Other DBs
NCBI-GeneID: 132641679
NCBI-ProteinID: XP_060214727
Position
5:134171978..134181703
AA seq 703 aa
MSSTAYGISEPISTGGPTELDVVRNRELEKLLADAGLYESHEEAIKREEVLGRLDQIVKT
WVKNVCRAKGFNDDLVNEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHAMREDFFGELH
RMLEEMPEILELHPVPDAHVPVMKFKFNGVSIDLLYANVSLWVIPEDLDISQESILQNVD
EQTVRSLNGCRVTDQVLHLVPNIQSFRTALRCMRLWAKRRGVYSNVTGFLGGINWALLVA
RICQLYPNAAPSMLVSRFFRVYSLWRWPNPVLLCPINEGSLGLAYWDPRRNFKDRQHLMP
IITPAYPCMNSSYNVSTSTLRVMMEEFHRGNEICEAIEANKASWGSLFEPFPFFEAYRNY
LRIDIAAESEDDMRKWKGWVESRVRLLTLKIERDTAGVLQCHPHPGEFSDKSTPFHHSYF
MGLRRKQGTNPQQGEQFDIRLTVEDFKRDVYQYSFWQSNMRIHVCHVRRKDLPNFVFPGG
VRPAQPAKSESRSKSLGSAKTTSPDAACSRKRKHDEVNTGFNSKESLAVSCSDASSPGET
RELKRFEADIGDTLSSSGTLVDNQIEVSVKSTSPVSASGAAVTETIAVIQSAEQTGGQQS
APHGVEDLGDELELTNGVKHFDGANELQTEPPTAEQTVEAATSEEKDIIGGSSHKVLQPE
GLEELEPIEPASSSSIASAAFVVPQKPLIRFNFTSLRKTTEST
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgagtagcactgcatatggaatatctgaaccaatttcaactggtggaccaactgaattg
gatgttgttagaaaccgcgaattggaaaagcttcttgcagatgcaggcttatatgaaagt
catgaagaagccattaaaagggaagaagtgctagggagattagaccagattgtgaagacg
tgggtgaaaaatgtctgtcgtgctaaaggcttcaatgacgacctggtcaatgaggcaaat
gcaaaaatcttcacattcggttcatatcggcttggtgtgcacggccctggtgctgatata
gacacactatgtgttggacctaggcatgcgatgcgtgaggacttctttggtgagcttcat
agaatgcttgaagagatgcctgaaatactagagcttcatcctgttcctgatgctcacgtt
cctgttatgaagttcaagttcaatggcgtttctatagaccttctttacgcgaatgtatca
ctctgggttattcctgaggacttggacatctctcaagagtccatactacagaatgtggat
gagcagactgttcgtagtcttaatggatgcagagtaacagatcaagttttgcatttagta
cccaacattcagagtttccgtaccgcactgagatgcatgaggttgtgggcaaaaagacgt
ggagtttactcaaatgttaccggatttcttggcggtataaattgggcgctacttgttgct
cggatatgccagctttatcctaacgcagctcctagcatgttggtctctcggtttttcaga
gtctacagtttgtggcgctggccaaacccagttttgctgtgtccaataaatgaaggatct
cttgggcttgcctattgggatcctcggaggaatttcaaggataggcagcacctaatgccg
ataataactccagcgtacccctgcatgaattctagctacaatgtttcaacgagtaccttg
cgtgttatgatggaagaatttcatagggggaatgaaatttgtgaggcaatagaagctaac
aaagctagctgggggagtctatttgagcctttccctttctttgaagcctatagaaactac
ttgcgaatagacatagctgcagaaagtgaggatgacatgaggaaatggaaaggatgggtt
gaatctagggtacgcctgcttactctaaagattgagagagacactgccggtgttcttcaa
tgccatccacatccgggtgaattctcagataaatctacgccatttcaccattcttatttt
atgggattacgtagaaaacaaggtactaatcctcaacaaggtgaacaatttgatataagg
ttgacagttgaggattttaagcgagatgtatatcaatattctttttggcaatctaacatg
aggattcatgtgtgtcatgtaagacgaaaagatcttcctaactttgttttccctggagga
gtacgtcctgctcagcctgcaaaaagtgaaagtcgttcaaaatcacttggttctgctaag
acaacatctccagatgctgcttgtagcagaaagagaaaacatgacgaagttaatacaggt
tttaactctaaagagtccctggccgtgagttgcagtgatgccagctcaccaggtgaaact
agagagttgaaacggtttgaagctgatattggtgataccttgagcagtagtggtacactt
gttgataaccaaattgaagtttctgtcaaaagtacatcgcctgtgtctgcatcaggtgca
gctgtaacagagacaatagcagtcattcaatctgcagaacagactgggggccagcaaagt
gcacctcatggtgtagaagatcttggggatgaactggagttgacaaatggagttaagcat
tttgatggagccaatgagctgcagacggagcctccgacagcagagcaaacagttgaggca
gcaacatcagaggaaaaggacataattggtggttctagccataaggtcctacaacccgaa
ggcttggaagaacttgagccgattgagccagcatcctcctccagcatagcatctgctgca
tttgttgttcctcagaagcctctcattagatttaattttacttctttgcggaaaacaacc
gagagcacatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system