KEGG   Lonsdalea britannica: CKQ53_16255
Entry
CKQ53_16255       CDS       T05623                                 
Name
(GenBank) excinuclease ABC subunit UvrC
  KO
K03703  excinuclease ABC subunit C
Organism
lbq  Lonsdalea britannica
Pathway
lbq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lbq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CKQ53_16255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lbq03400]
    CKQ53_16255
DNA repair and recombination proteins [BR:lbq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CKQ53_16255
SSDB
Motif
Pfam: UvrC_RNaseH_dom UvrC_RNaseH GIY-YIG UVR HHH HHH_5 HHH_3 HHH_2 MciZ DUF7508
Other DBs
NCBI-ProteinID: AXW88372
UniProt: A0AAD0WLZ5
Position
complement(3557925..3559763)
AA seq 612 aa
MSESFDAPAFLKTVTSQPGVYRMYDADDTVIYVGKAKDLKKRLSSYFRRNVGSRKTEALV
KCIHQIDVTITHTETEALLLEHTYIKRYQPRYNVLLRDDKSYPLIFLSSDKHPRISIHRG
AKHAKGEYFGPFPNGNAVRETLMLLQKLFPIRQCEDSVYRNRSRPCLQYQIGRCLGPCVS
GLVSDEEYRQQVEYVRLFLLGKDQQVLTRLIAQMEAASKTLNFEEAARIRDQIQSVRRVT
EKQFVSGAGDGEDLDVIGVAFDAGLACVHVLFVRQGKVLGSRSYFPKIPGGTELAEVVQT
FVGQFYLQGSLSRTLPTEILLDFSLPEQQLLTDSLTEIAGRKVQIQSRPRGDRARYLKLA
RTNANTALISKLSQQSTIHQRLTALANVLQLPEIKRMECFDISHTMGEQTVASCVVFDAN
GPLRSEYRRYNITGITPGDDYAAMTQVLKRRYGKALDDSKIPDVIVIDGGKGQLGQAKAV
FDELQVPWDKTQPLLLGVAKGSDRKAGLETLFFEATGEGFALPPDSPALHVIQHIRDDSH
DHAISGHRKKRAKVKNTSSLELIEGVGPKRRQTLLKYMGGLQPLQNASIEEIANVPGISS
ALAEKIYYALKH
NT seq 1839 nt   +upstreamnt  +downstreamnt
gtgagtgaaagctttgatgccccggcgttcttaaaaacggtaaccagccaacctggggtt
taccgtatgtatgatgctgacgatacggttatttatgtcggtaaggcgaaggacctgaaa
aagcgtctctccagctacttccgtcgcaacgtaggtagccgcaaaacagaggcgctcgtc
aaatgcattcatcagatcgatgtgaccatcacgcataccgaaacggaagcgctgctgcta
gaacatacctacatcaagcgttaccagcctcgctacaacgtgttattacgcgatgataaa
tcttatccgctgatcttcctgagctctgataaacatcccagaatttccattcatcgcggc
gccaagcatgcgaagggcgaatattttgggcctttccccaatgggaatgcggtacgcgaa
accttgatgctgctgcaaaagctgtttcccattcgtcagtgcgaagatagcgtttatcgc
aatcgctcccgtccgtgtctgcaatatcagattggtcgttgtctcggcccctgcgtctcc
ggactcgtcagcgatgaagagtaccgtcagcaggtggaatacgtccgattgttcttgctg
ggaaaagaccagcaggtgctgacgcgtctaatcgctcagatggaagccgcaagcaaaacg
ctgaacttcgaagaagcggcgcggatacgcgatcaaattcaatcggtacgccgggtaacg
gaaaaacagttcgtttccggcgcaggagatggcgaagatctcgatgtcatcggcgttgcc
ttcgatgcgggtctggcctgcgtacatgttttgttcgttcgccagggcaaggtgctgggt
agccgcagttacttccccaaaattccgggaggcacggaactggctgaagtcgtacaaact
ttcgtggggcaattctacttgcagggaagtctttcccggacgttgcctaccgaaattttg
ttggatttttcgttgccggaacaacagcttctgacggactcattaaccgagatcgcagga
cgcaaagtgcagatccaaagccgtcctcgcggcgaccgcgctcgttatctcaagctggcg
cgaacgaatgccaataccgcgctgatcagcaaactgtctcagcaatcaactattcatcag
cgtttgacggcattagccaatgttttgcagctgcccgaaatcaaacgcatggaatgtttc
gacatcagccacacgatgggggagcagacggtcgcatcctgcgtggtcttcgacgcaaac
ggaccgcttcgttccgagtatcggcgctataatattaccgggatcaccccaggcgatgat
tacgcggcgatgactcaggtgctgaaacggcgttacggcaaagcgctggatgacagtaaa
attccggatgtcatcgtgattgatggcgggaaagggcagttggggcaggctaaagccgtt
ttcgatgaactccaggttccctgggataaaacacagccgctgcttttgggcgtcgcgaaa
gggagcgatcgaaaagccgggctggaaacgctgttttttgaggcgacgggagagggcttc
gccttgccgcccgattcgcctgcgctacatgtcattcagcacattcgcgatgattcccac
gatcacgccatctccggtcatcggaagaaaagagccaaggtcaaaaataccagtagcctg
gaactgatcgagggggtggggccgaagcgtcgtcaaacgttgcttaagtatatgggcggg
ctgcaaccgcttcagaatgccagtatcgaagaaattgctaatgtgccgggaatttcttca
gctttggcagaaaaaatttactatgcattgaaacactag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (13)   

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