KEGG   Lates calcarifer (barramundi perch): 108885747
Entry
108885747         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: catenin delta-1-like
  KO
K05690  catenin (cadherin-associated protein), delta 1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04519  Cadherin signaling
lcf04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    108885747
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    108885747
SSDB
Motif
Pfam: Arm ARM_ARMC5 HEAT HEAT_2 ARM_PUB HEAT_EZ Atx10homo_assoc SYS1_M Adaptin_N Calsequestrin ARM_UBP24_USP9X-Y
Other DBs
NCBI-GeneID: 108885747
NCBI-ProteinID: XP_018535681
Position
Unknown
AA seq 650 aa
SYEGTLDGDMSGPXDMYYWGGGAPLAQGXRGSMASLDSTLRKGPGPGGWRQPELPEVIAM
LNYRLDPVKSNAAAYLQHLTYXNDKVKSDVRRLKGIPALVSMLDNPNKEVHYAACGALKN
ISYGKDPDNKIAIKNCDGVPALIRLLRKTHDQDLTDTITGTLWNLSSHDSVKMEIVDHAL
HALSDEVMVPHSGWERGXNGAGGGEENCKPRHLEWETALTNTAGCLRNVSSERSEARRKL
RECTGLVDSLMYIVQSQIDCKDVDNKLIENSVCLLRNLSYHVHREIPGCERYQEAAPINQ
GPAPSSQKGGCFSSRKGKDEWFSKGRKDEDAAADIIDIPKRTTPAKGYELLYQPEVVRIY
TSLLKESKNPTVLEASAGAVQNLCAGRWTYGRYIRALLRQEKGLPMMTELLAHGNDRVVR
AMSGALRNLAIDARNRDLLGKHAVPHLVANLPGGGQSQPVRALSEETVVSVLSTLHEVLG
SSLEAAKTLRASQGIERLVLINKDGNRSEREVRGAGLVLQTVWGYKELRRTLEKDGWKKT
DFMVNLNPPSNNTRANGGYEDSTLPLIDKGSKGDREMIPVNDFGPDAYSTLDQRGRRNTL
DNTLEPADKDAVQGGMYGERQASLPLMDSYDEKLIVCITRRQPPPTYCPC
NT seq 1954 nt   +upstreamnt  +downstreamnt
gagttacgagggcaccttggatggtgacatgagcggtccangggacatgtactattgggg
tggaggagcgcctctggcccagggtngaagaggaagcatggcctcattggacagcactct
aaggaaaggtccgggccctggtggttggcgtcagccagagctgccagaggtcatcgccat
gctcaactacaggctagacccggtcaagagcaacgcagctgcatacctgcagcatctcac
ttacnagaatgataaggtgaagtctgatgtgcgtcgtctgaaaggcatcccagctctggt
ttctatgcttgacaacccaaacaaagaggttcactacgcagcctgtggagcgctaaagaa
catctcatatggcaaagatccagacaacaagatcgccatcaagaactgtgatggagtgcc
tgctctgatcaggctgctgagaaagacccacgaccaagacctcactgacactatcacagg
gacgctgtggaacctgtcgtctcatgactccgtgaaaatggaaattgtggaccatgcact
gcacgccctctccgatgaagtgatggtgccccattcaggatgggagcgaggangcaatgg
agcaggaggcggggaggagaactgcaagcccagacaccttgagtgggagacggccctcac
caacacagcaggctgcttgagaaatgtgagttcggagcgaagtgaggcgaggaggaagct
gagggagtgcacaggattggtcgattcgctcatgtacattgtccagtcccagatcgactg
taaagatgttgacaataagttgatagagaacagtgtgtgtctgctgaggaacttgtctta
tcacgtgcaccgcgaaatccctggctgtgagcgataccaggaggccgcgcccatcaacca
gggccccgccccctccagccagaagggtggctgcttcagctcccgaaagggcaaagatga
gtggttttccaaaggtaggaaagacgaggatgcagctgcagatataatagacattccaaa
gaggaccacgcctgctaaaggctatgagctgttgtaccagccggaggtggtgcgcatcta
cacctctctgctaaaggagtctaagaaccccactgtgttggaagcctcagccggagctgt
tcagaacctgtgcgccggccgctggacttatggacgatacatccgtgccttgctgcgtca
ggagaagggtctacccatgatgactgagctgctggcccatggaaatgaccgagtggtccg
agccatgtctggagccctccgcaacctggccattgatgcgcgcaatagagatctactagg
taaacacgcggtgcctcacctggtggccaacctgcccggtggtggtcagagtcagcctgt
gcgagcgctgtcagaagagacggtggtgtcagtattgagcacacttcatgaggtgctggg
ctctagcctggaagcagccaagaccctcagggcctcgcagggcatcgagagactggtgct
cattaacaaggatggtaatcgctctgagcgtgaagtacgtggtgctggcctggtgctgca
gacagtgtggggctacaaggagctgcggcgcactttggagaaggacggctggaagaagac
agacttcatggtcaacctaaaccctcccagcaacaacactagagccaatggaggatatga
ggacagtactctgccgctcatagacaaaggcagcaaaggggaccgggaaatgattccagt
gaatgactttggaccagatgcctactccacactggaccagagagggagaaggaacactct
ggataacacactcgaacctgctgacaaagatgcagtacagggagggatgtatggggagag
gcaggcctctttgcctctaatggattcttatgatgaaaaactgatagtgtgcatcacaag
acgacagcctcctcccacctactgcccttgctga

  All links  
Gene (7)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system