KEGG   Lates calcarifer (barramundi perch): 108896145
Entry
108896145         CDS       T04895                                 
Name
(RefSeq) tubulin beta-4B chain
  KO
K07375  tubulin beta
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04145  Phagocytosis
lcf04517  IgSF CAM signaling
lcf04540  Gap junction
lcf04814  Motor proteins
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    108896145
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    108896145
  09144 Cellular community - eukaryotes
   04540 Gap junction
    108896145
  09142 Cell motility
   04814 Motor proteins
    108896145
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108896145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcf03036]
    108896145
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108896145
   04147 Exosome [BR:lcf04147]
    108896145
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     108896145
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    108896145
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108896145
  Exosomal proteins of colorectal cancer cells
   108896145
  Exosomal proteins of bladder cancer cells
   108896145
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 108896145
NCBI-ProteinID: XP_018550681
UniProt: A0A4W6FBW5
Position
LG19:complement(5458199..5462273)
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPSGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGEEDMA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggaaatcgtgcacctgcaggcaggccagtgtggaaaccaaattggagctaagttc
tgggaggtgataagtgacgaacatggcatcgacccgtccgggacgtaccatggggacagc
gacctgcagctggagcgaatcaacgtgtattacaacgaggcaacaggtggcaagtatgtc
cctcgtgcagtcctggttgacttggagccaggaacgatggactctgtgaggtctggtccg
tttggccaggtctttagaccagacaacttcgtctttggccagagtggagcaggtaataat
tgggctaaaggccactacactgagggagctgagctggtggactcggtccttgatgtggtg
aggaaggaggcagagagctgcgactgcctccagggcttccagctcacacactccctgggg
ggaggcaccggctctggcatgggcacactgctcattagcaaaatccgagaggagtatcca
gaccgcattatgaacactttcagcgtggtgccctcacccaaggtgtcagacacagtggtg
gagccatacaatgccacgctgtctgttcaccagctggttgagaacacagatgagacctac
tgcattgataacgaggccctgtatgacatctgctttcgcacgctgaaactcaccacgccc
acctatggtgacctcaaccaccttgtctcagccaccatgagtggggtgaccacctgcctg
cgcttccccggccagctcaatgctgatctgaggaaactggctgtcaacatggtgcccttc
cccaggctgcacttcttcatgccaggttttgcacccctcaccagccggggcagccagcag
tacagggcactgacagttcctgaactcacccagcagatgttcgatgccaagaacatgatg
gctgcttgcgacccacgccacggccgctaccttacagttgccgccatcttccgaggccgc
atgtccatgaaggaggtggatgagcagatgctgaacgtgcagaacaagaacagcagctac
tttgtggaatggatccccaacaatgtcaagacagccgtctgtgacatccctccccgtggc
ctcaagatggctgccactttcatcggcaacagcacagccattcaggagctgttcaaacgc
atctcagagcagttcaccgccatgttccgccgcaaggccttcctccactggtacacgggc
gagggaatggacgaaatggagttcacagaggctgagagcaacatgaacgacctggtgtct
gagtaccagcagtaccaagatgccactgctgaggaggagggcgagtttgaggaagaaggc
gaagaggacatggcctag

  All links  
Gene (889)   
   RefGene (886)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (901)   

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