KEGG   Lates calcarifer (barramundi perch): 108898051
Entry
108898051         CDS       T04895                                 
Name
(RefSeq) poly(A) polymerase type 3 isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108898051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108898051
Enzymes [BR:lcf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     108898051
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     108898051
SSDB
Motif
Pfam: PAP_NTPase PAP_central NTP_transf_2 MTPAP-like_central Nrap_D2 LisH PPR_long
Other DBs
NCBI-GeneID: 108898051
NCBI-ProteinID: XP_018553410
Position
LG7_1:16960127..16965172
AA seq 411 aa
MTSSTKSQGPPTLGFPKRYGITDPISEDLPNQADFIQTRKLTDCLKSYGVFEDDLELQHR
EKVVKKLELLFKEWLKEMCVEMNVPELVTEKVGGKVFPFGSYHLGVHSKGADIDALCVGP
GFLERKDFFTSFYEKLKAQEEVKGIRAIEKTYVPVIKLNYEGTEIDLTFAQVALKSIPEN
LNLLDDKMLQNIDKRCARSLNGYRVTEEILSLVPNIYNFRLALRAIKLWAKRRNIYSNML
GFLGGISWAILVARICQVYPNAIASTLVIKFFKVYSMWVWPIPVRLRIVEDYYYNLPFWD
PRINLSDRCHIMPIITPAYPQQNTSFNVTPSTLTIITEEMERGLVIAQEIQQEKADWSKL
FETPNFFEKYQYVLNYLEKNNYCHVQNMRTYTLLPKIRTFAPKLFLIVYHF
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgactagttcaacaaagagccaaggtccaccaaccctaggcttccccaagcggtatggg
atcactgatcctatcagtgaggatctgcctaaccaggctgactttatccagactagaaag
ctgactgactgtctgaaatcatatggtgtgtttgaggacgacttggagctgcagcacaga
gagaaagttgtgaaaaaactggagttgctctttaaggagtggctcaaagaaatgtgtgta
gaaatgaatgtacctgagttggtaacggaaaaggttgggggcaaagtctttccatttggc
tcctatcacctgggagttcactcaaaaggtgctgacattgatgctctctgtgttggacct
gggtttcttgagagaaaggacttcttcacgtccttctatgagaagctgaaagcccaggag
gaggtcaaaggcatacgggctattgagaagacatatgtccctgtcatcaaactgaactat
gaaggaactgagattgacttaacctttgcccaggtggcactgaagagcattcctgaaaat
ctgaaccttcttgatgacaagatgttgcagaacatagataaacgctgcgccaggagtctc
aatggctacagagttacggaagaaatcctcagccttgtgcctaacatttataacttcaga
ctcgctttgagagccatcaagctgtgggccaaacggcgtaacatttactctaacatgctg
ggcttcttgggaggtatatcatgggccatactggtcgccagaatttgtcaggtgtaccca
aatgctatagcatccaccctggtgatcaaattttttaaggtctactccatgtgggtgtgg
ccaatcccagttcgcttgaggatagtagaggattactactacaaccttcctttttgggat
cccaggattaatctaagtgaccgctgccacataatgcccatcattaccccagcataccca
cagcagaacacgtcattcaatgtgactccctccaccttaaccatcataacagaagagatg
gagcggggccttgtcatcgctcaggaaatacagcaggaaaaagcagactggtccaaactc
tttgaaacgccaaacttttttgagaagtaccagtatgtattaaactacttagaaaaaaat
aattattgccatgtacaaaatatgcgcacatacacactgcttcctaaaataaggacattt
gctccaaaactgtttttaattgtttatcatttttaa

  All links  
Gene (22)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

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