KEGG   Leptothrix cholodnii: Lcho_3433
Entry
Lcho_3433         CDS       T00681                                 
Name
(GenBank) transcriptional regulator, Crp/Fnr family
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
lch  Leptothrix cholodnii
Pathway
lch02020  Two-component system
lch02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:lch00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Lcho_3433
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Lcho_3433
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lch03000]
    Lcho_3433
Transcription factors [BR:lch03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    Lcho_3433
SSDB
Motif
Pfam: HTH_Crp_2 cNMP_binding HTH_24 MarR_2 Crp GntR TrmB WHD_RecQ_mid_bact MarR HHH_XRCC3_RpoA NirdL-like_HTH HemN_C HTH_11 wHTH-PRTase_assc Phage_rep_O
Other DBs
NCBI-ProteinID: ACB35691
UniProt: B1Y335
Position
complement(3834789..3835544)
AA seq 251 aa
MAPVDPSFQTASRPTREPLRQRARAATRDELEMVPWLRVLAVDERERVIADLQVVDAAVG
DFVCKIGRPASFWFGVVDGLLKMSNDSSVGTSITFTGVPPGAWFGEGTLLKREVYRYNIE
PLRKSVVAGLPATTFEWLLDRSIAFNRYVMNQLNERLGQFIAAREIDRLNDPDTKVARGL
AALFHPVLYPGVGEVLRITQQELAYLVGLSRQRVNEALKTLQAQGLIRIEYGGLRVLDLA
GLRRVLHRAPE
NT seq 756 nt   +upstreamnt  +downstreamnt
atggcccccgtcgacccctccttccagaccgcatcgcggccgacgcgcgagccgctgcgc
cagcgcgcgcgcgccgccacccgcgacgaactcgagatggtgccgtggctgagggtgctg
gcagtcgacgaacgcgagcgggtgatcgccgacctgcaggtggtggatgcggcggtgggc
gacttcgtctgcaagatcggccggccggcgagcttctggttcggcgtggtcgacggcctg
ctcaagatgagcaacgacagctcggtcggcacctcgatcaccttcaccggcgtgccgccg
ggcgcctggttcggcgagggcacgctgctcaagcgcgaggtctaccgctacaacatcgag
cccttgcgcaagagcgtggtggcgggcttgccggccaccaccttcgagtggctgctcgac
cgcagcatcgccttcaaccgctacgtgatgaaccagctcaacgagcggctcggccagttc
atcgccgcgcgcgagatcgaccgcctcaacgaccccgacaccaaggtggcgcgcggcctg
gccgcgctgttccacccggtgctctaccccggcgtgggcgaggtgctgcgcatcacgcag
caggagctggcgtatctggtcgggctgtcgcgccagcgggtcaacgaggcgctgaagacg
ctgcaggcgcagggcctgatccgcatcgaatacggcggcctgcgggtgctcgacctggcc
ggcctgcggcgcgtgctgcaccgtgcaccggaatga

  All links  
Gene (3)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (19)   

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