KEGG   Latimeria chalumnae (coelacanth): 102363590
Entry
102363590         CDS       T02913                                 
Symbol
CWC22
Name
(RefSeq) CWC22 spliceosome associated protein homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcm03041]
    102363590 (CWC22)
Spliceosome [BR:lcm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    102363590 (CWC22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    102363590 (CWC22)
SSDB
Motif
Pfam: MA3 MIF4G PRP38
Other DBs
NCBI-GeneID: 102363590
NCBI-ProteinID: XP_014346803
Position
Un
AA seq 1773 aa
MPRRDSSSDSDSSSSSSSSSSSSESSSSGSSSSSSGSSSSGSGSSGSSSDSNSSHSSSVS
PSKAKSKHRSSRDDGNSRRKEEKTAEKTDKHESRDDRYVKRHEKSDFQEERKASDVREKG
RSKDGSSERDRSKRHSPGHSRKEFSSSFSQQRRRESPDSRSRAKGDRDQRPSRKSDSITP
PSSRQRHRSSDLESPKPASQRELSSSENKDRWEKANNEKHARSLEKSRSQTSNFSSEKRS
SQVEERSRRERSRSYSPQSSKDRSHLTAKQSFKNKDSKPNSPKKKNERGSESPDFHSSSK
PASQRSSKLSEEGREKDFRQAVSSQERRNVQEVSQDSHKYRSSKNDQSPSEGRQSQLRVS
TRRKRSSSQSSGTSSERSSLSSRNKRNKDIRSSPLQRQSRSSSSSSGRNDMREPSKNPKS
QRSSSHGRDGMEVHYVKERSKVSVVQEKRGQRSPGQPRESGWSEDIHSTSSKRRSHSSSS
SGHESPRSRGSSRTKRIPHPSGSGRGEDRISSVTKPDGKSDSSYSSDSDASNSENSRKIK
YRHNLKQQVSSVQRKPPSPVSNSKGTGSERESPDSAKESLTKERKLCPADSSGKGSSSQN
VSPQAEVSQSQHLEEQIADDQSCVETGKHGSEGVSSSEKAGYRSNSEDSDSSIKVTPSSI
KGKLLLKDTEKIERDLDFLQKKVSPDKEPDSTLALDFADKNRQCDVSESSQKNVQSPHIS
SQKQQSPDQDNSGATEEHLYIQRKRQRSSSSEKESSRSRSQSPRSPPHKMVPKSKSPVVV
GKSSESFLPSPSAKLHEERNYGHKETPDESGKGSADERSHGDSSKRRVANLGENVGSQDR
KSSSNSDSDNSEESAASSGVAVQKMKSSVSQIKHGSGQGSRESCSPHQKSPSPDSRYREH
RRSRSPQDTGYSDRSNYERERFGSGRYNFKNTQPREKDEEHEWHSNRERDSDRRKRGKSP
SPVKKDKESGTQSSSMHEEPPVKKKKEELDPILTRTGGAYIPPAKLRMMQEQITDKSSLA
YQRMSWEALKKSVNGLINKVNVSNIANIIHELLQENIVRGRGLLARSTTQAQGASPIFTH
VYAAVVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTTSKFIAHLINQNVAHEVL
ALEMLTLLLERPTDDSVEVAIGFLKECGLKLTEVSPRGINAIFERLRNILHESEIDKRVQ
YMIEVMFAIRKDGFKDHPIIPEGLDLVEEDEQFTHMLPLEDDYNPEDALNVFKVDPDFLE
NEEKYKEIKKEILDEGSSGSESGDDEEESEEENEEDDEEDEGEQKVTIHDKTEVNLVAFR
RTIYLAIQSSLDFEECAHKLLKMEFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCM
LKKDYMEAFESIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSVPWSVLECIKLSEETTT
SSSRIFVKIFFQELCEYMGLPKLNARLKDVTLQPFFEGLLPRDNPRNTRFAINFFTSIGL
GGLTDELREHLKNAPKIIMTQKQDVESSDSSSSSSSDSNSDSGSGSSSSSSSGTSDSSES
SSGSSSDSDSSSSSSTSGHSSNSGGSKTKGKKKREPESINRKKSSEKELLERKRESRRQD
SGDEDVRKLDKHRSKHSKQSDRRDEISKYDREDEYKDHKRSERETERNRDFEYRRMDSRK
EREDGRNHTRSENDRDRYRNREDDQYTRRRDRSKSRERGRKEASSRDSSEERYRNGVDRQ
SEKYIKDSRYSGRSRESRKYEDRWRESSPRRRK
NT seq 5322 nt   +upstreamnt  +downstreamnt
atgcctagaagggatagtagcagtgacagcgattccagttcctcctcctcctcttctagc
agcagcagtgaatctagtagtagtggatccagcagtagcagcagtggatccagtagcagt
ggaagtggctctagtggaagtagcagtgatagcaacagtagtcacagttcatctgttagc
ccttcaaaagcaaaaagtaaacacagatcatccagagatgatgggaatagcagaagaaag
gaagaaaagactgctgaaaaaacagataaacatgaatcacgggatgatcgctatgtaaaa
agacatgaaaaatctgattttcaagaagaaagaaaagcatcagatgtgagagagaaaggc
aggtcaaaggatggctcatcagaaagggataggagtaagagacattctcctggacattct
agaaaagaattctcaagcagctttagccaacagaggcgccgagaaagtccagattcaagg
agcagagcaaaaggggatagggatcaaagaccaagtaggaaatcagacagcattactcct
ccaagtagcagacaaagacaccgaagttctgatttggaaagtccaaagcctgcttcacaa
agagaactatccagttcagaaaataaagataggtgggaaaaagcaaacaatgaaaaacat
gcaagatctctagaaaagagtagatcccaaactagcaacttctcaagtgagaagagatct
tcacaggtagaggagaggtctagaagagaacgatcaagaagttatagccctcaaagttca
aaagatagaagtcatcttacagctaagcagtcatttaagaacaaggatagtaaaccaaac
agccctaaaaagaaaaatgagagaggatctgagagcccggactttcattcaagttctaaa
cctgcttctcaaagaagttccaagctctcagaggaaggaagagaaaaagattttaggcag
gctgttagttcacaagaaagaagaaatgttcaagaagtaagccaagatagccacaagtac
agaagttctaagaatgatcagtcacctagtgaaggaagacagtcccaactgagagttagt
acaagaagaaagcggtcttctagtcagagttctggaacctcctcagaaagatcaagcctg
tcttcaagaaacaagagaaataaagatataaggtcatctccgctgcaaagacaatccaga
agctcctcctcttctagtggaaggaatgacatgagagaaccttcaaaaaaccccaagtct
cagaggtcatcatctcatggaagagatggaatggaggtgcattatgtgaaagaaagaagt
aaggtttctgttgtacaggagaagagaggccagagaagcccaggacaaccaagagagtca
ggctggtctgaagacattcactcaactagcagcaaaagacgttcccattcctcttctagc
tcgggtcatgagtcacctagaagtagaggttcctctagaacaaaaagaatcccacaccct
tcaggaagtggaagaggggaggatagaataagctctgtaacaaaaccagatgggaaatct
gatagctcatattctagtgacagtgacgcatcaaattctgaaaattctaggaaaattaag
tatagacacaaccttaaacaacaagtgtctagtgtacaaaggaagccaccttcacctgta
tctaatagtaaaggaactggaagcgagagagaaagtcctgacagtgcaaaagagagctta
accaaagaaaggaagctttgtcctgcagatagttctgggaagggatcatcttctcaaaat
gttagcccccaggctgaagtgtctcaaagtcaacatttagaagaacaaattgctgatgat
cagagttgtgtggaaacagggaagcatggttctgaaggagtttcttcaagtgaaaaagca
ggttaccggtccaattcagaagattctgattcttccattaaagttactcctagctctata
aaaggaaaacttcttttaaaagatacagaaaaaattgagagagacttggactttttgcaa
aagaaagtaagtcctgataaagagccagacagcacattggctttagattttgctgataaa
aacaggcagtgtgatgtttcagaaagctctcaaaaaaatgtccagagtccacacatatcc
agccaaaagcagcaaagcccagatcaagataacagtggagccacagaagaacatctgtat
atacaaagaaagagacaacgatcctcatcctctgaaaaagagagttcgagatctcggtca
cagagtcctaggtcacctccacataagatggttccaaagtctaaaagtcctgttgtagtt
gggaaaagctcagagagttttctgccttcaccatctgcaaagctgcatgaagaaaggaat
tatggacacaaggaaactccagatgaatcgggtaagggatctgctgatgagagaagccat
ggggacagttccaaaaggagagttgctaatttaggagaaaatgttggttcccaggacagg
aagagctctagcaactcagacagtgataacagtgaggagagtgctgctagcagcggtgta
gctgttcaaaaaatgaaaagtagtgtgtcacaaataaaacatggatcaggccaggggagt
agagaaagctgtagcccacatcaaaaaagcccttctcctgacagcagatatcgggaacat
agaaggtcaaggtccccacaagacacaggttattctgaccggagcaattatgagcgagag
aggtttggaagtgggcgatacaatttcaaaaatacacagccaagagagaaagatgaagag
catgaatggcattcaaacagagagagggattctgatcgccggaagagaggaaaatctcca
tcacctgtaaagaaagacaaagaatctggcacacagagctcatctatgcatgaagaacca
ccagtgaaaaagaagaaggaagagttggatcctatcctgacacgaacaggtggagcatat
attcctcctgcaaagctcaggatgatgcaagaacaaattactgacaaaagcagcttggca
tatcaaagaatgagttgggaagccctaaaaaaatcagtaaatggtctcatcaataaggtt
aatgtttctaacatagccaacatcattcacgaactccttcaggaaaatattgtccgggga
aggggtttgttggctaggtcaactacacaggcacagggtgcttcacccatctttacacat
gtgtatgcagcagttgtggcaattatcaattcaaaattcccccaaattggagagcttatt
ttgaaaagattaattctaaattttcgcaaagggtatcgcagaaatgataagcaactttgc
ctgacaacttcaaaatttattgcacaccttattaatcaaaatgtggctcatgaagtttta
gcactggaaatgctcactcttctcttggaaagacctactgatgatagtgtggaagttgca
attggatttctgaaggaatgtgggctgaaattgacagaggtttcccctagaggcattaat
gctatatttgaacgtcttcgcaacattctgcacgaatctgaaattgacaagcgtgtccag
tacatgatagaagtcatgtttgcaatccgcaaagatggctttaaggatcatcccatcatt
ccagaaggacttgatctagtagaagaagatgaacagttcactcacatgctacccttggaa
gatgactataatcctgaagatgcacttaatgtgtttaaggtggatcctgattttctagaa
aatgaagaaaaatataaagagattaaaaaagaaatccttgatgagggtagcagtggctca
gaatcaggtgatgatgaagaggagagtgaagaggaaaatgaggaggatgacgaagaggat
gaaggagaacagaaggtaacaatccatgacaaaacagaagtaaacttggttgcctttcga
cgtacaatctatcttgcaattcagtcaagcttggactttgaagaatgtgctcacaagctg
ttaaagatggaatttcctgaaagccaaacaaaagaactatgcaacatgattctcgattgt
tgtgctcaacaaagaacgtatgaaaaattttttggcctgctggcagggcgtttttgcatg
ttaaagaaagattacatggaagcttttgaatctatttttaaagaacagtacgataccata
caccgtttggaaacaaacaaattgcgaaatgttgccaagatgtttgcccatcttctctac
acagattctgttccatggagtgtccttgagtgtattaagttgagtgaagaaactaccaca
tcttctagtagaatatttgtgaagatttttttccaagaactttgtgaatatatgggtctt
ccaaagcttaatgcaagattaaaagatgtgacactgcagcctttctttgaaggactactt
cctcgggataatcccagaaacacacgctttgccatcaacttctttacctcgattggcctt
ggagggttgacggatgagctccgtgaacatttaaaaaatgcaccaaagataatcatgaca
cagaagcaggatgttgagtcatcggactcctcttcatcttcatcttctgattctaattct
gattcagggagtggcagcagcagtagtagcagtagtggtacaagtgatagcagtgagagt
agctcagggtcatccagtgacagtgactcttcatccagtagtagcaccagtggccacagc
agtaactcaggtggttctaaaacaaagggaaaaaagaaaagagagccagaaagtatcaat
agaaaaaagtcaagtgaaaaggaactacttgaaaggaagcgggaaagcaggcgtcaggac
agcggtgatgaagatgttagaaaattggataaacatagaagcaaacattccaagcagtcg
gataggagagatgaaatttcaaaatatgatcgggaggatgaatataaagaccacaagcgc
agtgaaagagaaactgaaagaaaccgggattttgaatataggcgtatggactctagaaaa
gagagagaagatgggagaaaccatacccgatctgaaaatgacagagacagatatagaaac
agggaggatgatcaatatactaggcgaagagaccgatcgaagtccagagaaagaggccgt
aaggaagccagctccagagatagcagtgaagaacgctatcggaatggtgttgacaggcag
tcagaaaagtacatcaaggacagtaggtactctggtcgctccagagagtcgagaaaatac
gaggacaggtggagagaaagttccccaaggaggaggaaatag

  All links  
Gene (87)   
   RefGene (84)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (96)   

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