KEGG   Larimichthys crocea (large yellow croaker): 104923595
Entry
104923595         CDS       T04659                                 
Symbol
cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lco03041]
    104923595 (cwc22)
Spliceosome [BR:lco03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    104923595 (cwc22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    104923595 (cwc22)
SSDB
Motif
Pfam: MA3 Cnd1
Other DBs
NCBI-GeneID: 104923595
NCBI-ProteinID: XP_027146936
Position
XVIII:5091239..5102417
AA seq 1025 aa
MAMKRLAATGMDSPDRSQSPVPVQRERSGPSEDESSPAAERSQQAGSVERSPKERPSAEA
SPAGSAASSSSDSDSSSSSSSSEEDEHHGALRKIRSSVAQIKRSRSKSRSREQDRSASKE
RDRSGSRGRDRSGSRGQDRSGSRGRDRSGSRGRNRSGSRGRDRSGSRGRDRSGSRGRDRS
RSRSRSRSRGRDRSRSRERDRERYNRERYPRKRYDDWRDDRGGRFDRRNNRDAELDHRRR
GRSASPPADREPAASEEPPVKKKKEELDPILTRTGGAYIPPAKLRMMQQQITDKSSLAYQ
RMSWEALKKSINGLINKVNVSNIVMIIQELLQENIVRGRGLLARSVLQAQAASPIFTHVY
SAVVAIINSKFPQIGELILKRLILTFRKSYRRNLKQQCLTASKFVAHLINQNVAHEVLCL
EMLTLLLERPTDDSVEVAIAFLKECGLKLTEVSPRGINAIFERLRNVLHESAIDKRVQYM
IEVMFAIRKDGFKDHPVIPEGLDLVDDEDQFTHMLPLDDEYNTEDILNVFKLDPDFLENE
EKYKTIKRDILDEGSSDSGEEGDGSDEDEDDEEEKEEEGEDEKVTIFDQTEVNLVAFRRT
IYLAIQSSLDFEECAHKLIKMDFPDSQTKELCNMILDCCAQQRTYEKFFGLLAGRFCLLK
KEYMESFEGIFSEQYDTIHRLETNKLRNVARLFAHLLYTDSVPWSVLESIRMSEETTTSS
SRIFVKILFQELCAYMGLPRLNQRLKDPTLQPFFEGLFPRDNPRNTRFAINFFTSIGLGG
LTDELREHLKNAPKMIMTQNQEVESSDSSSSSSSSSSSSDSSSSDSSSDSDSSDSSSSSS
SSSSSSDSDGKHRKKKKRKEQIEVKKKRKEKDKKKKDKPSDKKRGGRKNDDEDDSGTEKR
ARKERKGRAREGEEEQREHARETEERERARDGARRSRRDERSEEREQQPEEERRRKMDDK
GRQRDGDRERERDRGMERERERGRERETEEKREREREREKPRDRERNKENRDRNRDRERE
ERRRR
NT seq 3078 nt   +upstreamnt  +downstreamnt
atggcgatgaaacgcctggcagccacaggcatggactctccagacagaagtcaaagtcct
gtccctgtacagagagagcgcagcggaccttcagaggacgagtctagtccagcggcagag
agatcacaacaggccggctctgttgagagaagccccaaagagaggccgtccgctgaggcc
agtcctgcaggcagcgccgcctccagcagctcagacagcgacagcagcagcagcagcagc
agcagcgaggaggatgaacatcacggggctctgaggaagatccggagcagtgtggctcag
atcaaaagatcccgatctaagtccaggtccagggagcaagacagatctgcatccaaagaa
agagacagatccggttccagaggacgagacagatccggttctagaggacaagacagatcc
ggttccagaggacgagacagatccggttccagaggacgaaatagatccggttccagagga
cgagacagatccggttccagaggacgagacagatccgggtccagaggacgagacagatcc
aggtccaggtccaggtctaggtccagaggccgagacagatccaggtccagagaaagagac
cgggagcgctacaacagagagcgctacccaaggaaacgctatgacgactggcgtgacgac
aggggcgggcgttttgaccggcggaacaatcgcgatgcagaactggatcacagaagacgt
ggccgctcggcctccccaccagcggacagggagccagcggcgtccgaggagccgccggtc
aagaagaagaaggaggagctggacccgatcctgacgaggacgggtggagcttacatcccc
ccggccaagctacgcatgatgcagcagcaaatcaccgacaagagcagcctggcctatcag
aggatgagctgggaggctctgaagaagtccatcaatggtctgatcaacaaagtcaacgtg
tcgaacatcgtcatgatcatccaagagctgctgcaggagaatatcgtcagggggaggggt
ctgctggctcgctcggtgttgcaggctcaggcagcatctccgatctttacccacgtttac
tccgccgttgtcgccatcatcaactccaagttcccccagattggagagctgatcctcaaa
cgcctcatcctgaccttcaggaagagctaccgccgcaacctcaagcaacagtgcctgact
gcctcaaagttcgtggctcatctcatcaaccagaacgtggctcatgaggttttgtgtctg
gagatgctcactctgctgctggagcgtccaaccgacgacagcgtggaggtcgccatcgcc
ttcctgaaggagtgtggactcaaactgaccgaggtgtcccctcgaggaatcaacgccatc
tttgagcgcctcaggaacgtcctccacgagtcagccatcgataagagggtccagtacatg
atcgaagtgatgtttgccatcaggaaggacggcttcaaggatcacccagtgatcccagag
ggcctggacctggtggacgatgaagaccagttcacccacatgttgccgctggacgacgag
tacaacacagaggacatcctcaatgtgttcaagctggacccagacttcctggagaatgag
gagaaatacaaaactattaaaagagacatcctggacgaaggcagcagcgattcaggggag
gagggagacggcagcgacgaagatgaagacgacgaagaggaaaaagaggaggagggagaa
gatgagaaggtcaccatctttgatcagaccgaagtcaacctggtggctttcagaagaacc
atctacctcgccatacagtccagtttggactttgaggagtgcgctcacaaactgatcaag
atggactttcctgatagccagacgaaggagctgtgcaacatgatcctggactgctgtgct
cagcagaggacctacgagaagttctttggtctgctggccgggaggttctgtctgctgaag
aaggagtacatggagagtttcgaggggattttttcagagcagtacgacacaatccatcga
ctggagaccaacaaactgaggaacgtggctcggctgtttgctcacctgctctacacggac
tctgttccctggagtgtgttggagtcgatcaggatgagtgaggagaccacgacgtcgtcc
agcaggatctttgtaaagatcctcttccaggagctctgcgcatacatgggcctccccaga
ctcaaccagaggctcaaagacccgactctgcagccgttcttcgaaggtctctttcctcgt
gataatcccagaaacactcgctttgccatcaacttcttcacctccatcggactgggagga
ctgacggacgagttgagggaacatttgaagaacgctcccaagatgatcatgactcagaac
caggaagtggaatcctcggactcgtcctcatcctcttcatcctcctcatcctcctcggac
tcctcctcctccgactcctccagtgattcagactcgtccgactcttcatcctcctccagc
agcagcagcagcagctcagactcagacggcaaacacaggaagaagaagaagagaaaagaa
caaattgaggtgaagaagaagaggaaagagaaggacaagaagaagaaggacaaaccctcc
gacaagaagcgaggcgggcgcaagaacgacgacgaggacgacagcggcaccgagaagcgg
gcgaggaaggagaggaaaggccgtgcgcgagagggggaggaggagcagcgagagcacgca
cgcgagacggaggagagagagcgcgcacgtgacggcgcccgccggagcaggcgggacgag
aggtcggaagagagggagcagcagccggaggaggagaggaggcgaaaaatggacgataag
ggcagacaaagagacggagatagggagagagagagagaccgagggatggaaagagagagg
gaacgagggcgagagagagagacggaggagaagagagagagggagagggaacgagagaag
ccgagggatagagagaggaataaagagaacagagacaggaacagagaccgggagagagag
gagaggaggcggagataa

  All links  
Gene (103)   
   RefGene (100)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (109)   

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