KEGG   Larimichthys crocea (large yellow croaker): 104934549
Entry
104934549         CDS       T04659                                 
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco00900  Terpenoid backbone biosynthesis
lco01100  Metabolic pathways
Module
lco_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:lco00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    104934549 (ggps1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:lco01006]
    104934549 (ggps1)
Enzymes [BR:lco01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     104934549 (ggps1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     104934549 (ggps1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     104934549 (ggps1)
Prenyltransferases [BR:lco01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   104934549 (ggps1)
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 104934549
NCBI-ProteinID: XP_019121850
Position
III:complement(11021378..11036084)
AA seq 315 aa
MDGDAQATSERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVVIEVTEMLHNA
SLLIDDIEDSSTLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTMEHPEAVRVFTRQL
LELHRGQGLDIHWRDTYTCPTEQEYRNMVLQKTGGLFGLAVGLMQLFSDWKQDLKPLLDT
LGLYFQIRDDYCNLRSRDYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTE
NMDIKRYCVDYLEKVGSFAYTRQTLRDLEVEAYRLIKEFGGNPQLESLVKHLSQIYREPE
DTAESSTEPQSSHNQ
NT seq 948 nt   +upstreamnt  +downstreamnt
atggacggtgacgcacaagccacctctgagcgaattctgctggaaccatacaagtacttg
ttgcagcttccaggcaagcaagtgagaaccaaactatcccaagcatttaaccactggctt
aatgttccagaggacaaactgcaggtggtcatcgaggtgactgagatgctgcacaacgcc
agcttgctcatcgatgacatcgaggacagctccacactgaggcgaggcttccccgtggcc
cacagcatctacggcattccctccgtcatcaactcggccaactacgtctacttcttgggc
ttggagaaagtgctgacaatggagcatcccgaggctgtccgggtgtttacccggcagctg
ctggagctgcaccgcggtcagggcctggacatccactggagggacacctacacttgtccc
actgagcaggagtaccgcaacatggtgctgcagaagactggggggctctttggcctggcc
gtgggcctgatgcagctcttttcagattggaaacaggacttgaaacccctcctggacaca
ctgggcctctactttcagatccgcgacgactactgcaacctcagatctcgcgattacagc
gagaacaagagcttctgcgaggacttgaccgagggcaagttctctttccccaccatccat
gccatatggtcgcgtccagagagcacccaggttcagaacatcctgaggcagcgcacggag
aacatggacatcaagcgatactgcgtggactacctggagaaagtaggctcgttcgcctac
acccgccagactctgcgggacctggaggtggaggcctaccgcctcatcaaagagtttggg
ggaaaccctcaactggagagccttgtcaaacacctcagccaaatctatcgtgagcctgaa
gacacagcagagtctagtactgagccacagtccagccacaaccagtga

  All links  
Gene (7)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system