KEGG   Lysobacter capsici: LC55x_4728
Entry
LC55x_4728        CDS       T04162                                 
Name
(GenBank) outer membrane autotransporter barrel domain protein
  KO
K12685  subtilase-type serine protease [EC:3.4.21.-]
Organism
lcp  Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:lcp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lcp02000]
    LC55x_4728
   02044 Secretion system [BR:lcp02044]
    LC55x_4728
Transporters [BR:lcp02000]
 Other transporters
  Pores ion channels [TC:1]
   LC55x_4728
Secretion system [BR:lcp02044]
 Type V secretion system
  Autotransporter-1 (AT-1) family
   LC55x_4728
SSDB
Motif
Pfam: Peptidase_S8 Autotransporter PATR
Other DBs
NCBI-ProteinID: ALN87976
Position
complement(5223089..5226115)
AA seq 1008 aa
MAIVGGLLAASPMVFAQDTMGQVGDADSWRSEEFKRDWGLEAINAHYAYARGLTGKGVRL
GLFDSGTALAHPEFSGRNTTSIALSNDPECADPSVVAGVGACGATRGDRPGKSYYGLGPG
VPPALAARLIAAGLPYGFVYEEHGTHVAGTIGANRDGTGMHGVAFGADLTAATVFGDTYS
EWRLDPDGFYRPRPLYRTDPEDPATASMFDQAQALGTRAINHSWGPTRRNTTEAQLEAYY
AQQGAGYEVFASIYQPKDGKPASDLIQVWAAGNQAGGLASIAATLPRWHKEIEPYWLSVA
NVRLPGEGEEGYVIDESSSICGFSKDWCVSAPGTDIDSTIIAGRIDGRIDETDDYLRFLI
DNEAPEYDYGLLTGTSMAAPHVTGALGLLFERFPYLSSAQVRDVLLTTATDIGAPGVDEI
YGWGMLDLKKAIDGPGQLRVDSDVVMNQRAGGAKVWEGAAWDDWRNDIGGPGRLTKSGVG
WLRLSGNNDFAGLTVRQGVLELTGNNTYAAEVTGGALIVNGSLSSDQTLAVRSGGILAGS
GRIVGNARIEGVVSPGNSIGTLSVQGDYTQAAGSIYDAELSAGGQSDLISVSGKATLEGG
TLVVHHAPGQYLLGQSFNLLSADGGVSGQFAALDQTAFSPFLKFGLSYAANQVGVAVTRG
ASLASAAQTDNQRAAAAAADQLAIGQGIPQPLTQLFPAQAVAALDSLSGEGHASLRSIMV
DDQRHIRDAALARARAGRGAFAADADGEPSQGAWVELIKSGGTLDGDGNAARNEYNGSAT
LVGYDYRFDGGWRIGVLGGTGRSDSNDDRLDKGRVKSRHIGIYTGQNWGGFGLSAGFTFA
RQDVDLEPHRFQRLQRPHPRVVRRRQQAGLRRRRLSLQCRRLGVRTVCAVRPGAGEQRRV
PGNRRRRRADRPRRRQPGQSVDRGPALQRQPQGFATGRQLVEPARRPGPSPCHRRSEPGD
LGRLARRQCVHRAGRAVGRRRDLARSRHRRALERQWLAGTELQRSDRR
NT seq 3027 nt   +upstreamnt  +downstreamnt
ttggcgattgtcggcggcctgctggccgcttcgccgatggttttcgcgcaggacacgatg
ggccaggtcggcgatgccgacagctggcgcagcgaggaattcaagcgcgactggggcctg
gaagcgatcaacgcccactacgcctacgcgcgcggcctcaccggcaagggcgtacgcctg
ggcctgttcgactcgggcaccgcgctcgcgcatccggaattttccggtcgcaacaccacc
agcatcgcgctgagcaacgatcccgagtgcgccgatccgtcggtggtggccggtgtgggc
gcctgcggcgcgacccgcggcgatcgtccgggcaagtcgtactacggtctcggcccgggc
gtgccgccggcgctggccgcgcgcctgatcgccgcgggtctgccgtatggcttcgtgtat
gaagaacacggtacccacgtcgccggcaccatcggcgcgaaccgcgacggcaccggcatg
cacggtgtcgcgttcggcgccgacctcaccgccgcgaccgtgttcggcgatacctacagc
gaatggcgcctcgaccccgacggtttctaccgtccgcgcccgctgtaccgcaccgacccg
gaagaccccgccaccgcaagcatgttcgatcaggcgcaggcactgggcacgcgcgcgatc
aatcacagctggggcccgacccgccgcaacaccaccgaggcgcagcttgaggcgtattac
gcgcagcaaggcgcgggttacgaggtgttcgccagcatctatcagcccaaggacggcaag
cccgcgtccgatctgatccaggtgtgggcggccggcaatcaggccggtggtctggccagc
atcgccgcgacgctgccgcgctggcacaaggaaatcgagccgtactggctcagcgtcgcc
aacgtgcggctgcccggcgaaggcgaagaaggctatgtcatcgacgaaagctcgagcatc
tgcggtttcagcaaggactggtgcgtgtccgcgccgggcaccgatatcgacagcaccatc
atcgccggccgcatcgacggacgtatcgatgaaaccgacgactacctgcgtttcctgatc
gacaacgaagcgcccgaatacgattacggcctgctcaccggcacctcgatggccgcgccg
cacgtcaccggcgcgctcggcctgttgttcgaacgtttcccgtacctgagcagcgcgcag
gtgcgcgatgtgctgctgaccaccgcgaccgacatcggcgcgccgggcgtggacgagatc
tacggctggggcatgctcgatctgaagaaggccatcgatggtccgggccagttgcgcgtg
gacagcgacgtggtgatgaaccagcgcgccggcggcgcaaaggtgtgggaaggcgcggcc
tgggacgactggcgcaacgacatcggcggccccggccgcttgaccaagtccggcgtgggc
tggctgcgtctgagcggcaacaacgacttcgccggcctgaccgtgcggcagggcgtgctc
gaactgaccggcaacaacacgtatgcggcggaagtcaccggcggcgcgttgatcgtcaac
ggcagcctgagcagcgatcagaccctggcggtgcgcagcggcggcatcctcgccggcagc
ggccgcatcgtcggcaacgcgcgcatcgaaggcgtggtctcgccgggcaattcgatcggt
accttgagcgtgcagggcgactacacccaggcggccggttcgatctacgacgccgaactg
tcggccggcggccagtccgatctgatcagcgtcagcggcaaggcgacgctggagggcggc
accctggtcgtgcatcacgcgccgggccagtacctgctcggtcagtcgttcaatctgctc
agcgccgacggcggcgtcagcggccagttcgccgcgctcgatcagaccgcgttctcgccg
ttcctcaagttcggcctgagctacgcggccaaccaggtcggcgtggcggtgacccgcggc
gcgagcctcgcgtcggcggcgcagaccgataaccagcgcgccgcggcggccgcggccgat
caactcgcgatcggccaaggcattccgcagccgttgacccagttgttcccggcccaggcg
gtcgcggcgctggattcgctcagcggcgaaggccacgccagcctgcgttcgatcatggtc
gacgatcagcgccacatccgcgatgcggcgctggcgcgcgcgcgcgccggacgcggcgcg
ttcgccgccgatgccgacggcgaaccctcgcagggcgcgtgggtcgagctgatcaagtcc
ggcggcaccctcgacggcgacggcaatgccgcgcgcaacgagtacaacggttcggcgacc
ctggtcggttacgactaccgcttcgacggcggctggcgcatcggcgtgctcggcggtacc
ggccgcagcgacagcaacgacgaccgtctcgacaagggccgggtcaagagccgtcacatc
ggtatttacaccggccagaactggggcggcttcggcctgagcgcgggcttcaccttcgcc
cgtcaggacgtcgacctggagccgcatcggtttcaacggcttcagcgaccgcacccgcgc
gtcgtacgacgccgacagcaagcagggcttcgtcgaaggcggctatcgcttcaatgccgg
cgcctgggagttcgaaccgtatgcgcagttcgcccaggtgcgggtgagcagcgacgggtt
ccaggaaaccggcggcgccgccgcgctgaccggccgcggcgccgacagccgggtcaatct
gtcgaccgtgggcctgcgcttcaacgtcaacctcaagggttcgcaacaggacgacagctg
gttgagcctgcgcggcggcctgggccgtcgccatgccaccggcgatctgagcccggagac
ctcggtcgcctggcgcggcgccaatgcgttcaccgtgcagggcgcgccgttggccgacga
cgcgaccttgctcgaagccggcatcgccgcgcgcttgagcgccaatggcttgctggaact
gaactacagcggtcagatcgccgatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (5)   

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