KEGG   Leucoraja erinaceus (little skate): 129698694
Entry
129698694         CDS       T09122                                 
Symbol
cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
leri  Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:leri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:leri03041]
    129698694 (cwc22)
Spliceosome [BR:leri03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    129698694 (cwc22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    129698694 (cwc22)
SSDB
Motif
Pfam: MA3 MIF4G DUF7026 PRP38
Other DBs
NCBI-GeneID: 129698694
NCBI-ProteinID: XP_055493847
Position
7:19251948..19319524
AA seq 1802 aa
MARRDSSSDSDSSSSSSSSGSSNSSSSSSSSNSSGSSSSSSSGSSSSSSSSGGSSGSSSG
SSSSGLKEKRGRSPGNPRKKEERHFERRDRTSSHGDHRMRTSDRDRRNEKSTIREERRSD
NKQSRRSQEKRTESDRRRCSPESSRKDLSRSRSPQEVRRRYSPDSRSKIGDDRSRRHRRK
SNSSSPRQQRREYRSSSRSPRRSSRKEATTSKYSSRSEKADSHKRSPDSKDRRSKETRPT
SNRRGLQVDESTHQTHSRSYSPSRSRELHPNLDSKEKTRDGRRRRSPNSSRSPRREDHKS
SKSPDSHSSNVRHKSQKSNKIEESELGRRKEECIVTQGKTSDSPDSNEPSTKSPSYRKQS
AETSVRECSRNNSPESTKQNSPSVSSISRGDDRECTPRAQQEKPEASSCSSPKETQKPET
ESPKSSCHEIPEFQKTKMVQPDSLEESKMPADQEEYSQEPSPDQGKENWPENIHSTSNKI
VSASPSFEKDLPPNVSNEELKSKDFDLEKGKKDRSRNPSQSSRRRSSSTSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSEEDKSDKPGSDSEQPTSIHGLKKKGSNSETSPLPAKADSGR
ESPDGKEENRFEDFQTSAEKLTLCPADSTGKIPSQSHSPVEDQSQFPTSCDSVYGYPLTE
KEIQSPDEVSSSEKKHESDASESSPLQVTPSSQKSRKSPSDTERVEESCCQKVSPENKEP
DSTLSSDPTGDKGLQTVESSEVEDSNIQSPHITSQRQQSPVLESIDGKEPKCPQKKRQRS
SSPERRDGFGSGSESPDAPPHKIKSKSCSPVSSLRQLAGRSRSSSPKAQDEESRKSRDQS
GIEMTESVLRDESETVPASEVHDNLENPERIGDGEISSSSDSEESAASSGAAVQKMKSSV
VQIQLNSNQERVDSHSPRQRSSSPEHRRKGRERSGSRSPRNTNRNTYDRRPSSNGRHNDR
NLQSRGRDKESHMNIDRESDHKKRAKSPSPITRNKDDFNQSSSEPPLKKKKAELDPILTL
TGGAYIPPARLRMMQEQIADKSSLAYQRMSWEALKKSINGLINKVNVSNIANIIHELLQE
NIVRGRGLISRYIIQAQTASPIFTHVYAAVVAIINSKFPQIGELILKRLILNFRKGYRRN
DKQLCLSACKFVGHLVNQNVAHEVLCLEMLTLLLERPTDDSVEVSIAFLKECGMKLTEVS
PRGVNAIFERLRNILHESQIDKRVQYMIEVMFAIRKDGFKDHPIIPEGLDLVEENDQFTH
MLPLEDEYNPEDVLNVFKMDSEFLDNEQKYKDLKREILDEGSSDSGSGGEEGADDDAESD
DEDEDEAETEDGVKKITIHDKTEVNLVSFRRTIYLAIQSSLDFEECAHKLLKMEFPESQT
KELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKDYMEAFEGIYKEQYETIHRLETNKLRN
VAKMFAHLLYTDSVPWSVLECIHLSEDTTTSSSRIFVKILFQELCEYMGLPKLNQRLQDM
TLQPFFEGLFPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKIIMTQRQDVESSDS
SSSSSSSSDSDSDSSSDSESGSSSSSSDSDSSSGSSSSSSSSSSSSDSDDSKNKKVQNKK
EQGEDKMANRKRPNEREGSRKEQGSRHRSGSEEQERSGGRTRRHSGERREDSARYDREER
SERDRKHSDKDKEYERNRDLADKRAEYRKNDARNHSRSENDRNSSRNKDRGDHHSHREEV
SKSREKCREEIQTSRSSEEDRPKNGVDKRPGKNDRQESRYSERSKDCRKEDDRCRENSPR
RH
NT seq 5409 nt   +upstreamnt  +downstreamnt
atggccagacgggacagcagcagtgacagtgattccagctcatccagcagcagtagtggc
agtagtaacagctcctccagcagcagttcaagcaattcaagtggaagtagcagcagcagc
agcagtggtagcagtagcagcagcagcagcagtggtggtagttctggaagcagtagtgga
agctcctcgtcaggtcttaaggaaaaaagaggcagatcaccaggaaatcccaggaaaaaa
gaggaaaggcactttgagagaagagacagaacttcctcacatggggaccaccgaatgagg
acatctgacagagacagaaggaatgaaaagtcgactatcagggaagaaaggcgctcagat
aacaaacaatcacgccggtcgcaggaaaaaagaacggagagtgacagaaggcgatgttct
ccagaaagttctaggaaagatctttcaaggagccgtagtcctcaagaggttaggcgaaga
tatagtccggattcaaggagcaaaattggggatgataggagcagaagacacagaagaaaa
tctaatagctcttcccccagacaacaaaggagggaatacaggtccagttccagaagtcct
cgccgttcatcaaggaaagaggctactacttcaaagtacagcagtagatcagaaaaagct
gacagccataaaagaagtccagacagtaaggatagaagatcgaaggaaacgcgtccaacc
agtaacaggcgaggtttacaggtagatgaaagtacacatcaaacgcattcaagaagctat
agtccatcaagatcaagggaattgcatcccaatcttgattcaaaggagaaaaccagggat
ggtagacgtcgaagatcacctaactcgtctcgtagtcctcgcagagaagatcataaaagt
tccaagagtcctgattcacattcttcaaatgtaaggcacaaatcacagaaaagtaacaaa
atagaagaatctgaattgggtagaaggaaagaagaatgtattgttacacaaggaaaaact
tctgacagtccagacagtaatgagccaagcaccaaatccccaagttatagaaaacagtct
gctgagacctcagttagagagtgttcccgaaataacagtcctgaaagtacaaaacaaaat
tctccaagtgtctcctccataagtagaggcgatgatcgtgaatgtactcctcgagcacag
caagaaaaacccgaagcttcatcatgctctagtccaaaagaaacacagaaaccagagact
gaaagtcccaaatcatcatgccatgaaattcctgaatttcagaaaaccaaaatggtgcaa
ccagattctctggaagaaagtaaaatgcctgcagaccaggaagaatacagccaagaacca
agtcctgaccaaggaaaagaaaattggcctgagaacatacattccacaagcaataaaatt
gtaagtgcttctccgagttttgagaaagatttgcctccaaatgtcagcaacgaagaattg
aaaagtaaagattttgatttagagaaaggtaaaaaagataggagtagaaatccttctcaa
agttcaagacgaagatcatccagcacatcatcatcgtcgtcgtcatcatcctcttcctct
tcctcttcctcctcttcttcatcctcatcctcatcttcatcttcttcatcatccagtgaa
gaagataaaagtgacaagcctggttctgattcagagcagccaacatcaattcatggcctt
aagaagaaaggatctaattcagagacgtcaccactgcctgcaaaagctgacagtgggaga
gaaagccctgatggtaaagaagaaaataggtttgaagattttcagacatcagctgaaaaa
ctaacgctttgtcctgcagatagtaccggaaaaatcccttctcagagtcacagtcctgtg
gaagaccaatcccaattcccaacttcgtgtgatagtgtttatggatatccattaactgag
aaggaaatacagagtcctgatgaagtatcttccagtgaaaaaaaacatgaatctgacgca
tcagaatcctcccctttgcaggttacacctagttctcaaaaaagtagaaagtctccatca
gacactgaaagagtagaagaaagttgctgtcaaaaagtaagtcctgaaaataaggaaccg
gacagtacattgtcatctgatccaacaggtgacaagggtctacaaactgtagaaagctct
gaagtggaagattcaaatatccaaagtccacatatcaccagtcaaagacaacagagtccc
gttttagaaagcattgatggaaaggaaccaaagtgtcctcagaaaaagcgacaacgatca
tcttcccctgagaggagggatggttttggatctggatctgaaagtcctgatgcacctcct
cacaagataaaatccaagtcgtgcagtccagtttctagtttgagacagttagcaggacgt
tctcggtcatcttcacccaaagcacaggacgaagagagcagaaaatcaagggaccaatca
ggcatagaaatgactgaaagtgttcttcgggatgagagtgaaactgtccctgccagtgaa
gtccatgataatttggagaatcctgagaggattggagatggggagatttcaagtagctca
gacagtgaggaaagtgcagccagcagtggtgcagctgtccaaaaaatgaaaagcagcgtg
gtacagatacagctcaattcaaatcaggagcgggtagacagccacagtccacgtcaaaga
agctcttcccctgagcacagacgtaaaggtcgtgaaagatcaggatcaagatccccaaga
aataccaacaggaatacctatgacagaagaccatccagcaatggcagacataatgataga
aatttacaatctagaggtagagacaaagagagccacatgaacatagatcgtgaatcagac
cacaagaagagagcaaaatcgccatcaccgataacaagaaataaagatgatttcaatcag
agctcctctgaaccaccattgaaaaagaaaaaggcagaattggatcctattttaacactg
acaggtggagcgtacattcctcctgcacgattgagaatgatgcaagaacaaattgcagac
aaaagcagtttggcataccagcgaatgagttgggaagctctaaagaagtcaattaatggt
ctcatcaataaagtgaacgtctccaacatagcgaatataattcatgagcttcttcaagaa
aatattgttcggggaaggggattgatttctagatatattatccaggcacagactgcctct
cctatattcacacatgtttatgctgctgttgtggcaatcataaattcaaagtttcctcaa
attggggagctgattctcaagagattgattttaaatttccgcaaaggttatcgcagaaat
gacaagcaactgtgcctttcagcctgcaaatttgtaggtcatcttgttaatcagaatgtt
gcccatgaagtgttatgtttggaaatgctcacgttattgcttgagcggcccacggatgac
agcgttgaagtatcaattgcttttctgaaagaatgtggaatgaagctgacagaggtttct
cccagaggagtaaacgcaatatttgaacgtcttcgtaatattcttcatgaatctcagatt
gacaagcgagtccaatacatgatagaggtgatgtttgcaattcgtaaagatggttttaag
gatcaccccatcatacccgaaggccttgatctggttgaggaaaatgatcagttcactcat
atgctgcctttggaagatgaatataatcctgaagatgtattaaatgtcttcaagatggat
tctgagttccttgataatgaacaaaagtataaggatctaaaaagagaaatccttgatgaa
ggtagcagtgattctggctctggtggtgaagagggtgctgatgatgatgcagaaagtgat
gatgaagatgaggatgaggctgagactgaagatggtgtaaagaaaataactatacatgac
aagactgaagtaaatctagtatcatttcgtcgtaccatttatcttgctatccagtccagt
ttggactttgaagaatgtgctcataaattattgaagatggaatttcctgaaagtcaaacc
aaagaactatgcaacatgattctagattgctgtgcacaacaaagaacatatgagaaattt
tttggtctcttagcggggcgtttttgcatgttgaagaaggattatatggaagcttttgaa
ggtatctacaaagagcagtatgaaactatacatcgtttagaaacaaacaaactacgcaat
gtggccaaaatgtttgcacacctcctttatacggattcagttccatggagtgtacttgaa
tgcatccatttaagcgaagatacaacaacatcttccagcagaatctttgtaaagatcctt
tttcaagagctttgtgaatatatgggactccccaaactaaatcaaaggctgcaggacatg
accctgcagcctttctttgaaggtctctttcccagggataacccacgcaatactcgattt
gctatcaatttctttacttctattggtcttggaggactaacagatgaattacgagaacat
ttgaaaaatgcaccgaaaataataatgacgcagcggcaagatgttgaatcatcagattct
tcttcttcttcctcgtcctcttctgactccgactctgattcttcctctgattcggaatct
ggaagtagcagcagcagcagtgatagtgatagcagttcaggatcatctagtagcagctca
tcctccagcagcagcagtgactcggatgattcaaagaacaagaaagtccagaacaaaaag
gaacaaggtgaagacaaaatggcaaacagaaaaagaccaaatgagagagaaggatctaga
aaagagcagggaagcagacatcgaagtggcagtgaggagcaggaaagaagtggtggcaga
actcgccggcattctggagagagaagagaggactctgccagatatgatagagaggagagg
agtgaacgagatcgtaaacacagtgataaggataaggaatatgagcggaacagggacctt
gcagataaacgtgctgaatacaggaaaaatgatgcaagaaaccattctcgttctgaaaat
gataggaacagctccaggaacaaggatagaggtgatcatcacagtcatagagaagaagtg
tcaaaatctagagagaagtgtcgtgaagaaatccagacctcaagaagtagtgaagaagac
cgcccaaaaaatggcgtcgataagcgacctggaaagaatgatcgccaggagagtagatat
tcagaacgttctaaggactgtagaaaagaagatgacaggtgcagggaaaattctccaaga
agacactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (8)   

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