KEGG   Leucoraja erinaceus (little skate): 129708700
Entry
129708700         CDS       T09122                                 
Symbol
sars1
Name
(RefSeq) serine--tRNA ligase, cytoplasmic isoform X1
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    129708700 (sars1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:leri01007]
    129708700 (sars1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:leri03016]
    129708700 (sars1)
Enzymes [BR:leri01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     129708700 (sars1)
Amino acid related enzymes [BR:leri01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   129708700 (sars1)
Transfer RNA biogenesis [BR:leri03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    129708700 (sars1)
 Prokaryotic type
    129708700 (sars1)
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N NOD
Other DBs
NCBI-GeneID: 129708700
NCBI-ProteinID: XP_055510611
Position
24:complement(18734303..18759940)
AA seq 513 aa
MVLDLDLFRVDKGGDPDIVRQNQTQRFKDASLVDRLVKVDTEWRKCRFRADNLNKLKNLC
SKTIGEKMKRKEPVGESDVLPQNTQNLDDLNADILCGLTVTQIKKIRVLIDEAIGKCDNE
RLKLEVQRMDSLREIGNILHPSVPISNDEDADNRVEQTWGDCASRKKYSHVDLVVMVDGF
EGEKAAVVAGSRGYFLKGPLVFLEQALIQHALRSLSSQGYTPLYTPFFMRKEVMQEVAQL
SQFDDELYKVIGKGSEKSEDSSIDEKYLIATSEQPIAAFHRDEWLKPEDLPIKYAGFSTC
FRQEVGSHGRDTRGIFRVHQFEKIEQFVFASPHDNKSWDVFEEMIKTAEDFYQSLGIPYR
IVNIVSGALNHAASKKLDLEAWFPGSAAYRELVSCSNCTDYQARRLRIRYGQTKKMMDKA
DFVHMLNATMCATTRVICAILENYQTEDGVVIPESLRPYMPPGLTEMIKFVKPAPIDQEQ
SKKQKRQQEGNKKKPAFSDTSLENKVQNMSVNN
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggtgctggacctcgacctgttccgtgtggacaagggcggcgaccctgacatcgtccgc
caaaaccagacccagcgtttcaaggacgcgtcgctggtcgaccggctggtgaaggtggac
acggaatggaggaaatgtcggttccgtgcagacaacttaaacaaattgaaaaacctttgc
agcaaaacaattggtgaaaaaatgaagaggaaggaacctgttggtgaaagtgatgtgctt
ccacaaaacacacagaacctggatgatctcaatgctgacattttatgtggtttaactgta
actcagatcaagaaaatacgtgtcctcattgatgaagccattggaaaatgtgacaatgaa
cggctgaaactggaagtccaaagaatggacagtctgagggagattggtaacatcctgcat
ccctctgtacccatcagcaacgatgaggatgcagataatagagtggagcaaacatgggga
gattgtgcatccagaaagaaatactctcacgttgacttggtggtaatggtcgatggtttt
gagggagagaaagcagctgtagtggccgggagccgaggctatttcctgaagggtcctttg
gtgtttcttgaacaagctctgatccagcatgctctgcggagcctgagcagccaggggtac
actccactctatacaccgttcttcatgagaaaagaggtgatgcaagaagttgcacagctt
agtcaattcgatgatgaactctacaaggtaatcggaaagggcagtgagaaatcggaggac
agttcaattgatgagaaatacttgattgctacttccgagcagccaattgcagctttccac
agggatgaatggttgaagcccgaggatcttccgattaagtacgccgggttctccacatgc
ttccggcaggaggtgggctcccacggccgggacaccaggggcatcttccgtgttcaccag
tttgagaagatcgaacaatttgtttttgcgtccccccatgataataagtcatgggatgtg
tttgaggaaatgattaaaactgctgaagatttctaccagtcactaggcattccttaccgc
attgtaaatattgtttcaggtgcactgaatcatgctgcaagtaagaagttggatttggaa
gcctggttccctggatctgctgcctaccgggaattggtgtcatgctcaaactgtacagat
taccaagcacggcggctacggatcagatatggacaaaccaaaaaaatgatggataaagct
gactttgtgcacatgttaaacgccacgatgtgtgccacgacccgtgtcatctgtgccatc
ctcgagaactatcagactgaagatggggtggtgataccggaaagtctaagaccctacatg
ccaccaggtttgactgaaatgatcaagtttgttaagccagcacctatcgaccaggaacaa
tctaaaaaacagaaaaggcagcaggaaggaaacaagaagaaacctgcattctctgacacc
agtttggaaaataaagtacagaacatgtctgtcaacaattaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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