KEGG   Leucoraja erinaceus (little skate): 129713365
Entry
129713365         CDS       T09122                                 
Symbol
npc1l1
Name
(RefSeq) NPC1-like intracellular cholesterol transporter 1
  KO
K14461  Niemann-Pick C1-like protein 1
Organism
leri  Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:leri00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:leri02000]
    129713365 (npc1l1)
Transporters [BR:leri02000]
 Solute carrier family (SLC)
  SLC65: NPC-type cholesterol transporter
   129713365 (npc1l1)
SSDB
Motif
Pfam: NPC1_MLD NPC1_N Sterol-sensing Patched MMPL
Other DBs
NCBI-GeneID: 129713365
NCBI-ProteinID: XP_055518340
Position
35:14277787..14306741
AA seq 1350 aa
MSTRSPAAALLLFTLFCAVTCATVIHQPGYCAFSGECGMNPDVENPLIPSKVPCVFNKPA
FTLAPAHLERLKGVCPMLYTGDQNTRVCCTYPQLVALDASMTMSKALLVRCPSCARSFTN
LYCQNTCSPDQSLHINITRTLPYNMSGQPEDAVLEYSCYYDRHFADGSFNSCKDVRIPAT
GGLAISPMCGRYGATLCNTERWLGFQGDSSNGLAPLDINFVLVGNETPVAGGMVPYSGRF
WRCGQPVSAQGQACSCQDCSESCPVIPSPSPPPTPWTVGEIPGSLLMCIIAFLVLLALFI
LFLVLRRVHGDRCPSSTAGPGCSAKVSRDSQVWLGNMFRCWGTAVARRPLPVIAASLALV
IALSAGLSYISLTTDPVELWSAPDSRARREKDYHDANFGPFFRTNQVIITVPGRPDYTYN
SVLFGENTFSGMFDKDIVLQLLDFQNRLQDIQVWSEEAQRNISLRDICFAPLNPHSPDTR
DCAVNSLLQYFQNSRSLVNAQGNQTIHGVTGIVDWRDHFLYCANSPLSFKDNTVMGMSCM
ADYGAPVFPFLAVGGYKGADFTQAQAFIMTFSLNSYSADDPKLQFALLWEKEYLRILQEY
KNDKSIGFDFVYMAERSLEDEINRTTAEDIPIFAISYLVIFIYIALALGEYNSWRTVLID
SKITLGLGGIFVVLGAVLSSMGFYAYIGVPSSLIVLEVVPFLVLAVGADNIFILVLQYQR
DERRAGESREEQIGRVLGDVGPSMLLCSFSESVCFFLGALTKMPAVRTFALYAALAVLLD
FLLQMSAFVALLSLDARREEAARFDICCCVRSKTRKKQKKKEGFLLMLMRKYYAPFLLHS
VTRVIVIIVFLFMLCAAVFLALNVRVGLDQELALPTDSYMLDYFAGLNKYLEVGVPVYFV
TTAGYNFSSRAGMDGVCSSVACDTNSMTQKIQYATEFPKQSYIGIPASSWVDDFIDWLNP
MSRCCRVYGLGPNAGEFCPADKNSLLCFKNCLRTNFSGIIRPSSEQFDKYLPNFLNDTPT
LKCSKGGLGAYVNALKIGEGGEILASRFMAYHVPLKDSLEYTAALKAARMLADNITASMR
KVPGTDPNFEVFPYTITYVFYEQYLTVVNEGLFNVGLCLIPTFLVCCILLGMDVQSGLLN
LLTIIMIIVDTVGAMTLWSIDFNAVSLINLVTAVGMSVEFVSHLTRSFAVSTKENKVERA
KEATVNMGSAVFAGVALTNLPGIVVLYFAKAQLIQVFFFRLNLVITLLGMAHGLVFLPVL
LSYFGPGVKVAALSPKHGDTGPALDTTHGNGYCPKLGPDGVGEGKESPPMALCNGTTQLG
QDTAPGHTTTLTEKPLTGSENHTHSTISTL
NT seq 4053 nt   +upstreamnt  +downstreamnt
atgtcaacgagatctcctgccgctgctctgctgctgttcacgctcttctgcgccgtgacc
tgtgccaccgtgatccaccagccgggctactgcgcgttcagcggggaatgcggcatgaat
ccagatgtggagaatcctctaatcccatccaaggtgccgtgtgtgttcaacaagccggcc
ttcaccctagccccggcccatctagagaggctgaagggcgtgtgccccatgctgtacacg
ggcgatcagaatacccgcgtgtgttgtacttacccacagctagtggctctggacgccagc
atgaccatgtctaaggcgttgttggtccgttgtccatcgtgtgcgcgtagcttcaccaac
ctgtactgccagaacacgtgtagcccagaccagagtctccacatcaatatcacccgcacc
ctcccctacaatatgtcgggccagcctgaggacgccgtgctggagtacagctgttactac
gaccgacacttcgccgacggttccttcaactcgtgtaaggacgtgcgaatcccagcgacc
ggtgggctggccatctcgcccatgtgtggacggtacggggccactctgtgcaacactgag
cgctggctgggctttcagggagactccagcaacggtctggcaccgctggacattaacttt
gtactggtgggcaatgagacccccgtggccggcggcatggtcccgtactcgggccgcttc
tggaggtgcggccagcccgtgtccgcccagggtcaggcgtgttcgtgccaggactgcagt
gagtcttgccccgttatcccctctccctctcctccccccacaccctggacagtgggtgaa
atccccggctccctgctcatgtgtatcatcgccttcctggtcctgctcgccctcttcatc
ctgttcctggtcctgaggcgagtgcacggggatagatgcccgtcctctacagcggggccg
ggctgctcggccaaggtgagcagggacagccaggtgtggttgggcaacatgttcaggtgt
tggggcaccgcagttgcccggcgcccgctgcccgtgatcgccgcctctctggccctggtc
atcgccctgtcggccggtctcagctacatctctctgaccaccgaccccgtggagctgtgg
tcagcccccgacagccgggcccgccgggagaaggactaccacgatgctaactttggcccc
ttcttcaggaccaaccaggtgatcatcacggtgccgggccgcccggactacacttacaac
tcggtactgttcggggagaacacattctccggcatgttcgacaaggacatcgtgctacaa
ctgctcgacttccagaacaggctacaggacatccaggtgtggtcagaggaagcgcagagg
aatatctcgctgcgggacatctgcttcgcccccctcaaccctcactcgcccgacaccaga
gactgcgccgtcaacagcttgctccagtacttccagaatagcaggagcctcgtcaatgcc
caggggaatcagaccatccacggtgtgactggcattgtggactggagagatcacttcctc
tactgcgccaactcccccctatccttcaaggacaacacggtaatgggaatgagctgcatg
gcagattacggagcgccagtcttcccattcttggctgttggtggctacaaaggtgcagat
ttcactcaagcccaggcattcatcatgaccttctccctaaacagctacagtgccgatgac
cccaaactccagttcgcgctgctctgggagaaagaatacttgagaattctacaagagtac
aagaatgacaaatccatcggctttgactttgtctacatggctgagcgttctctggaagat
gagatcaacaggaccacagctgaagatattccaattttcgccatcagttacctggtgatc
ttcatctatattgccctggcactgggagagtacaacagctggagaactgttctgattgac
tcgaagattacgctgggactgggtggaatctttgttgtgttgggagcagtcctttcatcc
atgggtttctacgcctacattggggtcccctcctccctcattgttctcgaggtggtcccc
tttctagtgcttgccgtgggtgcagacaacatattcatccttgttctccaataccagagg
gacgagcggagagcgggagagagtcgtgaggagcagattggccgggtgctgggcgacgtg
ggccccagtatgcttctctgcagcttctcagagtccgtctgcttctttctgggtgctcta
accaagatgcctgcggtgcgtacctttgcgctgtatgcagccctggccgttctcctcgat
ttcctgctacagatgtcggcgtttgtggccctgctgtctctggacgctcggagagaggag
gcagcgaggttcgacatttgttgctgtgtgcgctccaaaacaaggaagaagcagaagaag
aaagagggtttcttgctgatgttgatgagaaagtattacgctccgttcctgctacactct
gtcacacgggttattgtgatcatcgtcttcctcttcatgttgtgcgcggcggtgtttctg
gcgctaaacgtccgtgtgggtctcgaccaggagctggccttgccaacggactcgtacatg
ctggattactttgctggcctcaacaaatacttagaggtgggcgtccccgtgtactttgtc
accacggccggttacaacttctccagcagagccggcatggacggggtgtgttccagcgtg
gcttgtgacaccaactccatgacccagaagatccagtacgccaccgaattccccaagcag
tcctacataggtatccctgcctcctcctgggtggacgactttatcgactggttgaaccca
atgtcacggtgctgtcgagtctacggtttgggccccaacgctggtgaattctgtccagcc
gacaaaaattcactgctctgtttcaagaattgcctccgaacaaatttcagcgggattatc
cgaccctccagcgagcagttcgacaaatacctgcccaacttcctgaacgacacccccacc
ctgaaatgctccaagggaggtttgggggcgtatgtgaatgccttgaagataggagaggga
ggggagattttggcctccagattcatggcctatcatgtgcctctgaaggattctctggag
tacacggctgccctgaaggctgcccgaatgctcgcggacaacatcacagcaagcatgagg
aaggttcccggcactgaccccaacttcgaagtcttcccgtacacgatcacctatgtgttt
tacgaacagtacctgacagtggtgaacgaggggctgttcaatgtgggcctctgcctcatc
cccaccttcctggtctgctgcatcctgctgggcatggatgtgcagtcgggcttgctcaac
ctcctcaccatcatcatgatcattgtggacacagtgggagccatgaccctgtggagcatc
gacttcaacgctgtctccctcatcaacctggtcacggcggtcggcatgtctgtggaattt
gtctcccacctcacccgctcgtttgctgtcagcaccaaggagaataaagtggaacgagca
aaggaggccacggtcaacatggggagtgcggtgtttgcaggtgttgccttaaccaacctt
ccaggcattgtggtcctgtatttcgccaaagcccaactcatccaggtatttttcttccgt
ctgaacctggtgatcacgttgctggggatggcccatggactggtcttcctccccgtactg
ctcagctactttggcccgggtgtcaaggttgcagcactctcgccgaagcacggtgacacg
ggacctgcgctggacaccacccatggcaacggctactgcccaaagctgggccctgatggc
gtgggggagggcaaagaatcgccacccatggcactgtgtaacgggacaacccagctggga
caagacacggcccctggacacacaaccaccctcacagagaaacccttgaccggctcagaa
aaccacacacactccaccatctctacattgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system