KEGG   Leucoraja erinaceus (little skate): 129713584
Entry
129713584         CDS       T09122                                 
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
  KO
K10373  tropomyosin 1
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri04260  Cardiac muscle contraction
leri04261  Adrenergic signaling in cardiomyocytes
leri04814  Motor proteins
leri04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:leri00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    129713584 (tpm1)
   04820 Cytoskeleton in muscle cells
    129713584 (tpm1)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    129713584 (tpm1)
   04261 Adrenergic signaling in cardiomyocytes
    129713584 (tpm1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:leri04812]
    129713584 (tpm1)
   04147 Exosome [BR:leri04147]
    129713584 (tpm1)
Cytoskeleton proteins [BR:leri04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     129713584 (tpm1)
Exosome [BR:leri04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   129713584 (tpm1)
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ TMF_DNA_bd PUMA_CC DUF745 Crescentin NBP1 ATG16 ADIP CENP-F_leu_zip EzrA Laminin_I XhlA DUF1664
Other DBs
NCBI-GeneID: 129713584
NCBI-ProteinID: XP_055518723
Position
36:14660360..14702940
AA seq 284 aa
MEAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKQTEDELDKY
SEALKDAQEKLELAEKTATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSESKSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKSIDDLEEKLAQAKEENLNMHQMLDQTLQELNNL
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaggccatcaagaaaaagatgcagatgctgaagctggacaaggagaacgccttggac
cgagccgagcaagcggaggccgacaagaaagcagccgaggacaggagcaagcagctggag
gatgagctggtgtcgctgcaaaagaagctgaagcagacagaggatgagctcgacaagtac
tcggaggctctcaaagacgcgcaggagaagctggagttggcggagaagacggcgacagac
gccgaggcagacgtggcctctctgaacaggcgcatccagctggttgaggaggagctggac
agggcccaggagcgcctggccaccgccctgcagaagctggaggaggctgagaaggccgcc
gatgagagtgaaagagggatgaaggtcattgagaacagggccctgaaggatgaggagaag
atggagctgcaggagatccagctcaaggaggccaagcacattgctgaggaggctgaccgc
aaatatgaggaggtcgcacgtaaactggtcatcattgagagcgacttggagaggactgag
gagcgagctgagctgtctgaatctaaatctgctgagcttgaagaagagttgaaaactgtg
accaacaaccttaagtcactggaggcacaggctgagaagtactcacaaaaggaagacaag
tatgaagaggaaatcaaagtcttgactgacaaactgaaagaggctgaaacccgtgctgag
tttgcagaaaggtctgtggccaagttggaaaaatccattgatgacttggaagagaaattg
gcacaagccaaggaagaaaacctcaacatgcatcagatgctcgatcaaaccctgcaggag
cttaataatttgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (21)   
   RefSeq(pep) (21)   
DNA sequence (21)   
   RefSeq(nuc) (21)   
Protein domain (15)   
   Pfam (15)   
All databases (59)   

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