KEGG   Lysobacter firmicutimachus: ABU614_08435
Entry
ABU614_08435      CDS       T11708                                 
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
lfh  Lysobacter firmicutimachus
Brite
KEGG Orthology (KO) [BR:lfh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lfh03009]
    ABU614_08435 (rsmB)
Enzymes [BR:lfh01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     ABU614_08435 (rsmB)
Ribosome biogenesis [BR:lfh03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    ABU614_08435 (rsmB)
SSDB
Motif
Pfam: Methyltr_RsmB-F RsmF-B_ferredox NusB FtsJ Methyltransf_25 Methyltransf_37 Methyltransf_12 MTS Methyltransf_5 Methyltransf_24 Methyltransf_23
Other DBs
NCBI-ProteinID: XCO77461
Position
1944419..1945732
AA seq 437 aa
MPTTAGGSGAQTRAIAARVLDAVLHRGRSLKAELAASLPALRDPRDRALVEAICFAVLRQ
PLRYERTLEAWMPRPPSARDGELRALLYVGLAQLDPLRLPEHAAVASTVEAARALGHPHQ
AGLVNALLRRAQRDGLPALDPTHSHWPSWLRGRLRRDWPEHYAAILAASALPPPMWLRVN
ALREPVQAYRARLAEAGIEALAGPGAALRLEQAMPVAALPGFDEGLVSVQDLSAQQVADA
LAPAPGARVLDACAAPGGKSAHLLERDPQLRLTALDIDAARLRRVEDTLRRLGLSERAVL
RAADAAEPAAWWDGRAFDAIVLDAPCSATGIVRRQPDVVLHRRETDLAALVGLQARLLDA
LWTTLAPGGTLLYATCSILQDENEHQVRAFLERTADARVEPLDARYGHDREVGRQRLPGE
DGGDGFFYARLRRAPAG
NT seq 1314 nt   +upstreamnt  +downstreamnt
ttgccgaccaccgccggcggcagcggcgcgcagacccgcgcgatcgccgcgcgcgtgctc
gatgcggtgctgcaccgcggtcgctcgctcaaggccgagctggcggcgagcctgccggcg
ctgcgcgacccgcgcgaccgcgccctggtcgaggcgatctgcttcgccgtgctgcgccag
cccttgcgttacgagcgcaccctcgaggcctggatgccgcggccgccatcggcgcgcgac
ggcgaactgcgtgcgctgctctatgtcggcctggcccagctcgatccgctgcgcctgccc
gagcacgccgccgtggcgtcgacggtcgaggccgcgcgcgcgctcggccatccgcatcag
gccgggctggtcaacgcgctgttgcgccgcgcccagcgcgacggcctgccggcgctggac
ccgacccactcgcattggcccagctggctgcgcggacgcctgcgccgcgactggccggaa
cattacgccgcgatcctcgccgccagcgccttgccgccgccgatgtggctgcgggtcaat
gccttgcgcgaacctgtgcaggcatatcgcgcccggctcgccgaggccggcatcgaggcc
ctggccggccccggcgcggcgctgcgcctggagcaggcgatgccggtcgccgcgttgccc
ggtttcgacgagggcctggtttcggtccaggacctgtcggcgcagcaggtcgccgacgcg
ttggcgcccgcgcccggcgcgcgcgtgctcgacgcctgcgccgcgcccggcggcaagagc
gcgcacctgctcgaacgcgacccgcaactgcgcttgaccgcgctcgacatcgacgccgcg
cggctgcgccgggtcgaggacactttgcgccgactcggcctgtccgagcgcgccgtgctg
cgcgccgccgatgccgccgagccggcggcctggtgggacggccgggccttcgacgcgatc
gtgctggacgcgccgtgctcggccaccggcattgtgcgccgccagcccgacgtggtcctg
catcggcgcgaaaccgatctggccgcgttggtggggctgcaggcgcgcctgctggatgcg
ctgtggaccacgctggcgcccggcggcaccctgctgtacgcgacctgctcgatcctgcag
gacgagaacgagcatcaggtgcgagcgttcctcgagcgcaccgccgatgcgcgggtcgag
ccactggacgcgcgctacggccacgatcgcgaggtcggccgccagcgcttgcccggcgag
gacggcggcgacggcttcttctacgcccgcctgcgccgcgcgccggccggctga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (13)   

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