KEGG   Leopardus geoffroyi (Geoffroy's cat): 123579927
Entry
123579927         CDS       T10761                                 
Symbol
TUBB1
Name
(RefSeq) tubulin beta-1 chain isoform X1
  KO
K07375  tubulin beta
Organism
lgf  Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04145  Phagocytosis
lgf04517  IgSF CAM signaling
lgf04540  Gap junction
lgf04814  Motor proteins
lgf05010  Alzheimer disease
lgf05012  Parkinson disease
lgf05014  Amyotrophic lateral sclerosis
lgf05016  Huntington disease
lgf05020  Prion disease
lgf05022  Pathways of neurodegeneration - multiple diseases
lgf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lgf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    123579927 (TUBB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    123579927 (TUBB1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    123579927 (TUBB1)
  09142 Cell motility
   04814 Motor proteins
    123579927 (TUBB1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    123579927 (TUBB1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    123579927 (TUBB1)
   05012 Parkinson disease
    123579927 (TUBB1)
   05014 Amyotrophic lateral sclerosis
    123579927 (TUBB1)
   05016 Huntington disease
    123579927 (TUBB1)
   05020 Prion disease
    123579927 (TUBB1)
   05022 Pathways of neurodegeneration - multiple diseases
    123579927 (TUBB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lgf03036]
    123579927 (TUBB1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lgf04812]
    123579927 (TUBB1)
   04147 Exosome [BR:lgf04147]
    123579927 (TUBB1)
Chromosome and associated proteins [BR:lgf03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     123579927 (TUBB1)
Cytoskeleton proteins [BR:lgf04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    123579927 (TUBB1)
Exosome [BR:lgf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   123579927 (TUBB1)
  Exosomal proteins of colorectal cancer cells
   123579927 (TUBB1)
  Exosomal proteins of bladder cancer cells
   123579927 (TUBB1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3
Other DBs
NCBI-GeneID: 123579927
NCBI-ProteinID: XP_045300038
Position
A3:complement(4241058..4248609)
AA seq 457 aa
MREIVHIQIGQCGNQIGAKFWEVIGKEHGIDAAGGYFGDCALQLERISVYYNEAHGGKYV
PRALLVDLEPGTMDSIRSSQLGALFHPDGFIYGNSGAGNNWAKGHYTEGAELAESVLDAV
RSASEACDCLQGFQLVHSLGGGTGAGMGTLLLSRIREDFPDRILNAFSVLPSPKVSDTVV
EPYNAVLSLRQLARHADACFCIDNEALYDICFRTLKLAAPSYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFTPGFAPLTSRDGRQYRALTVAELTQQVFDARNAM
AACDPRRGRYLTVACFFRGRMSTKEVDEQMLAVQTRHSACFVDWIPNNVKVAVCDIPPPG
LGMAATFVGNSTAVQELFGRVSEHFSAMFRRRAFVHWYTCEGMDVGEFAEAESDIHDLVS
EYQQLQDARAVPEEDGDVVGEAEVEPEDGPRAPGGAV
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgcgtgaaatcgtacacattcagatcggccagtgtggtaaccagatcggagccaagttc
tgggaggtgattggcaaggagcatgggatcgacgcggcggggggctactttggtgactgt
gccttgcagctggagaggatcagcgtgtactacaacgaggcccacggtgggaagtacgtg
ccgcgggccctgctggtggatctggagccggggacgatggacagcatccgctccagccaa
ctgggagccctctttcacccggatggcttcatctacggtaactctggggccggcaacaac
tgggccaagggccactacacggagggcgccgagctggccgagagcgtgctggacgccgtg
cgcagcgccagcgaggcctgcgactgcctgcaaggcttccagctggtgcactcgctgggc
ggcggcacgggcgcgggcatgggcacgctgctgctgagccggatccgcgaggacttcccc
gaccgcatcctgaacgccttcagcgtcctgccgtcgcccaaggtgtcggacacggtggtg
gagccctacaacgccgtgctgtccctgcggcagctggcgcggcacgccgacgcctgcttc
tgcatcgacaacgaggccctgtacgacatctgcttccgcacgctcaagctggccgcgccc
agctacggcgacctcaaccacctggtgtccctgaccatgagcggcgtcaccacgtccctg
cgcttcccgggccagctcaacgccgacctgcgcaagctggccgtgaacatggtgcccttc
ccgcgcctgcactttttcacgcccggcttcgcgccgctcaccagccgcgacggccgccag
taccgcgcgctcacggtggccgagctcacgcagcaggtgttcgacgcgcgcaacgccatg
gccgcctgcgacccgcgccgcggccgctacctgacggtggcctgcttcttccgcgggcgc
atgtccaccaaggaagtggacgagcagatgctcgccgtgcagacgcgccacagcgcctgc
ttcgtggactggatccccaacaacgtcaaggtggccgtctgcgacatcccgccgccgggg
ctcggcatggccgccaccttcgtgggcaacagcacggcggtgcaggagctgttcggccgc
gtgtccgagcacttctcggccatgttccggaggagggcgttcgtgcactggtacacctgc
gagggcatggacgtcggcgagtttgccgaggccgagagcgacatccacgacctggtgtcc
gagtaccagcagcttcaagacgccagagcggttcccgaggaagacggagacgtcgtgggg
gaggcagaggtggaaccggaagacgggccccgggcacctggcggggccgtgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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