KEGG   Leopardus geoffroyi (Geoffroy's cat): 123580608
Entry
123580608         CDS       T10761                                 
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
  KO
K20177  vacuolar protein sorting-associated protein 3
Organism
lgf  Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lgf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    123580608 (TGFBRAP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lgf04131]
    123580608 (TGFBRAP1)
Membrane trafficking [BR:lgf04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    123580608 (TGFBRAP1)
SSDB
Motif
Pfam: Vps39_1 zf-Vps39_C CNH Clathrin TPR_Vps41
Other DBs
NCBI-GeneID: 123580608
NCBI-ProteinID: XP_045301511
Position
A3:55103803..55167372
AA seq 859 aa
MMSTKAFTLVSAVERELLVGDKEQGHIECVECCGKNLYVGTSDCFVYHFLLEERAQPAGT
ATFSATKQLHRHLGFRKPVSELRAASALNRLLVLCDNSITLVNMMTLEPVPSGARIKGAV
ALALNENPVSGDPFCVEVCIISVKRRTIQVFLVYEDRVQIVREVSTPEQPLAVAVDGHFL
CLALTTQYIILNYNTGVAQDLFPYCSDEKRPIVKRIGRQEFLLAGPGGLGMFATVAGISQ
RAPVHWSENVIGAAICFPYVIALDNEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA
TSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ
FAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEK
MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENSCLLTDSA
AWLEKHKKYFALGLLYHYNNQDAAAVQLWVNIVNGDIHDSTRSDLYEYVVDFLTYSLDQE
LVWKYADWVLQKSEEVGVQVFTRRPLDEQQNSFNPDSIITCLKKYPKALVKYLEHLVIDR
RLQKEEYHTHLALLYLDEVLQQRPGANSKGAEATETQAKLRHLLQKSDLYRVHFLIDRVR
GAGLPMESAILHGKLEEHEEALRILVHELRDFSAAEDYCLWRSEGRDPPYRQRLFHTLLA
MYLQPGPSVPELAVAATDLLNHHAAEFDAARVLQLLPGTWSVQLLRPFLTGAVRDSVHAR
RTTQVALGLAKSENLIYKYDKMKLKGSSVRLSDKKLCQMCQNPFREPVFVRYPNGGLVHT
HCAAGRHTNPSPPGPGART
NT seq 2580 nt   +upstreamnt  +downstreamnt
atgatgagcaccaaggccttcacgttggtctctgccgtggagcgggagctgctggtaggt
gacaaggagcaggggcacatcgaatgcgtggagtgctgtggcaagaacctgtacgtgggc
accagtgactgcttcgtctaccacttcctgctggaggagagggcgcagcccgcagggacg
gccaccttctctgccaccaagcagctgcaccggcacctgggcttcaggaagccagtgagt
gagctgcgagcggcctcggccctcaacaggctgctggtgctctgtgacaactccatcacc
ctggtcaacatgatgaccctggagcctgtcccctcgggggctcgcatcaaaggggcggtg
gcattggccttgaacgagaaccctgtgagcggagacccgttctgcgtggaagtctgcatc
atctcggtcaagcgcaggaccatccaggtgttcctggtgtacgaggaccgggttcagatc
gtcagggaggtgtcgacgccggagcagcccctggccgtggctgtggacggccacttcctg
tgtctggctctgaccacccagtacatcatcctgaactacaacacgggcgtcgcccaggac
ctgtttccttactgcagcgacgagaagcgacccatcgtcaagaggatcgggagacaggag
ttcctcctggcaggccccggaggactgggcatgtttgccacggttgccggtatatctcag
cgagcccccgtgcactggtcggagaacgtgattggggcagccatctgcttcccgtatgtc
atagctctggataacgaattcatcacggtgcacagcatgttggaccagcagcaaaagcag
accctgccctttaaggagggccacattctccaggattttgaaggaagagtgattgtcgcc
acaagtaaaggagtttacatcttggttccgttacccctggaaaagcaaatacaggatctt
ctagcaagccgtagagtggaagaggctttggttttagccaaaggagcccggaggaacatt
ccaaaagaaaaatttcaggtaatgtacagaaggattctgcagcaggcggggttcatacag
ttcgcacaacttcagtttctggaagctaaagagctcttcagaagcggccagcttgacgtc
cgggagctgatctctctctaccccttcctgttgcccacctcttcctcattcacacggtcc
caccctcctctccacgagtatgcagacctgaaccagctgacccagggggaccaggagaag
atggccaagtgtaagcgcttcctcatgagctacctgaacgaagtccgcagcacagaggtc
gcaaatggctacaaagaggacatcgacacggccttgctcaagctgtacgcggaggccgac
cacgacagtctgctggacctcctggtcaccgagaactcctgtcttctgacagacagcgct
gcctggctcgagaagcacaagaagtattttgcacttggactgctctatcattataataac
caagacgctgcggcagtgcagttatgggtgaacattgtgaacggggacattcacgactcc
actcgctcagacctatacgaatatgtcgttgattttcttacctatagcttagaccaggaa
ctcgtgtggaagtacgctgattgggtcctgcagaaaagtgaggaggttggagttcaagtt
ttcaccaggagacctttggatgaacagcagaacagttttaatcccgacagcattatcact
tgccttaagaaataccctaaagcccttgttaagtatctggaacatctggtcatagacagg
agactgcagaaggaagagtaccacacacacctggcgctcctctacctggacgaggtgctg
cagcagaggcccggcgccaacagcaagggtgcggaagcgacggagactcaggcgaagctg
cgacacctgctccagaagtctgacttgtaccgagtccacttcctgatagatagagtccgg
ggcgccggcctccccatggagagcgccatcctgcacggcaagctggaggagcacgaggag
gccctgcgcatcctggtgcatgagctgcgggacttctcggcggctgaggactactgcctg
tggcgctccgagggcagagacccgccgtaccggcagcggctcttccacacgctactggcc
atgtatctccagcccggcccctccgtgcccgagctggccgtggccgccacggacctcctg
aaccaccacgcggccgagttcgacgccgcccgcgtcctgcagctgctgccgggcacctgg
tcggtgcagctcctgcgcccgttcctgaccggggccgtcagggacagcgtgcacgcccgg
aggaccactcaggtggccctcggcctggccaagtccgaaaacctgatctacaagtacgac
aagatgaagttgaaaggaagctcagttcggctttcggacaaaaagctctgccagatgtgc
caaaatccctttcgtgagcccgtgtttgttaggtatccaaatggtggtctcgtccacacc
cactgtgctgccggcagacacacgaaccccagcccccccggccctggcgcacggacttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system