KEGG   Leopardus geoffroyi (Geoffroy's cat): 123605277
Entry
123605277         CDS       T10761                                 
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D isoform X1
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
lgf  Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04136  Autophagy - other
lgf04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:lgf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    123605277 (ATG4D)
   04136 Autophagy - other
    123605277 (ATG4D)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lgf01002]
    123605277 (ATG4D)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lgf04131]
    123605277 (ATG4D)
   03029 Mitochondrial biogenesis [BR:lgf03029]
    123605277 (ATG4D)
Peptidases and inhibitors [BR:lgf01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   123605277 (ATG4D)
Membrane trafficking [BR:lgf04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    123605277 (ATG4D)
Mitochondrial biogenesis [BR:lgf03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    123605277 (ATG4D)
SSDB
Motif
Pfam: Peptidase_C54
Other DBs
NCBI-GeneID: 123605277
NCBI-ProteinID: XP_045347840
Position
A2:7974006..7980770
AA seq 473 aa
MNSVSPAAAQYRSGSPEDARRPEGRRPRGPRVPDPNGLGPSGASGPALGSPGTAPGEPDE
VDKFKAKFLTAWNNVKYGWAVKSRTSFSKISSVHLCGRRYRFESEGDIQRFQRDFMSRLW
LTYRRDFPPLAGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWSEASGLGPSEPSG
LASPNRYRGPARWMPPRWAQGTPELEQERRHRQIVSWFADHPQAPFGLHRLVELGQSSGK
KAGDWYGPSLVAHILRKAVESCSEVTRLVVYVSQDCTVYKADVARLVARPDPTAEWKSVV
ILVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQ
PTVDVSQADFPLESFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSCSSA
TERYPMFTLAEGHAQDHSLDDLCSQLSQPTLRLPRTGRLLKAKRPSSDDFVFL
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgaactccgtgtcgccggccgccgcgcaataccggagcgggagcccggaggacgcgcgc
cgccccgagggccgcaggccgcggggcccccgagtcccggaccccaacggcctggggccc
tctggagccagcggcccggctcttggctcgcccgggaccgcccctggggagccggacgag
gtggacaagtttaaggcgaagttcctgacggcctggaacaacgtcaagtacggctgggca
gtcaaaagccggaccagctttagcaagatctccagcgtccacctctgtggccgccgctac
cgcttcgagagcgagggtgacatccagcgtttccagcgggatttcatgtcccgcctgtgg
ctcacctaccgccgggacttcccgcccctcgctggaggctgcctgacctcggactgtggc
tggggatgcatgcttcgcagcgggcagatgatgctggcacagggcctgctgctgcacttc
ctgcctagagactggacgtggtccgaggcctcaggcctgggcccctctgagccatcaggg
ttggcctctcccaaccgttaccgcgggcctgcacgctggatgcccccccgctgggcccag
ggcacccccgagctggagcaggaacgtcggcaccggcagatagtgtcctggttcgccgac
cacccccaggccccctttggtctacaccggctggtggagcttgggcagagctcaggcaag
aaggcgggtgactggtatgggccatctctggtggcacacatactcaggaaagctgtggag
agctgctcagaggtcacccgcctggtggtgtatgtttctcaggactgcacagtgtacaag
gcagatgtggcacgcctggtggccaggccggaccccacagctgagtggaagtctgtggtc
atcttggtgccggtgcggctgggtggcgagacgctcaaccctgtgtacgtgccctgcgtg
aaggagctcctgcgttcagagctgtgcctgggcatcatggggggcaagccgcggcattca
ctgtacttcatcggctaccaggatgacttcctgctctacctggacccccactactgccag
cccactgtggatgtcagtcaggctgacttccccctggagtcctttcactgcacctcaccc
cgaaagatggcctttgccaagatggacccaagctgtacggtggggttctatgctggagac
cggaaggagtttgagacgctctgctcagagctgaccagggtcctcagctgctcctcagcc
acagagaggtaccccatgttcaccctggccgagggccatgctcaggaccacagcctggat
gacctctgctcccagctctcccagccgacgctgcggctccctcgcacggggcggctcctc
aaggccaaacgcccaagttctgacgactttgtgtttttatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (7)   

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