KEGG   Leopardus geoffroyi (Geoffroy's cat): 123606130
Entry
123606130         CDS       T10761                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
lgf  Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03420  Nucleotide excision repair
lgf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lgf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123606130 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    123606130 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lgf04121]
    123606130 (ERCC8)
   03400 DNA repair and recombination proteins [BR:lgf03400]
    123606130 (ERCC8)
Ubiquitin system [BR:lgf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     123606130 (ERCC8)
DNA repair and recombination proteins [BR:lgf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      123606130 (ERCC8)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 WDR55 WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_RIG_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_WDR11_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 123606130
NCBI-ProteinID: XP_045350051
Position
A1:complement(128631610..128695524)
AA seq 396 aa
MLGFLSARQTGLDDPLRLRRAESTRRVLGLELNKDRDIERIHGSGVNTLDIEPVEARYML
SGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRNHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQTADIFNFEETVYSHHMSPVATKHCLVAVGTRGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRCEYILATASADSRVKLWDVRRASGCLFTLDQHNGKKSQAVESA
NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNDSRKALKFTVS
DGCSSEFVFVPYGSTIAVYTIYSGEQITMLKGHYKSVDCCVFQSHFQELYSGSRDCNILA
WVPSLYEPVPDNDEPTTKSQLNPAFEDAWSSSDEEG
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgttagggtttttgtcagcgagacagaccggtttggacgaccctcttcgcctccggaga
gcggagtccacacggagggttttgggactggagttaaacaaagacagagatattgaaagg
atccatggcagtggagttaatacccttgacattgaacctgttgaagcaagatacatgtta
tcaggtggttcagatggtgtgattgtactttatgaccttgagaactccagcagacaacct
tattacacatgtaaagcagtgtgttccgttggcagaaaccatcctgatgttcacaaatac
agtgtggagactgtacagtggtatcctcatgacactggcatgttcacatcaagctcattt
gataaaactctgaaagtgtgggatacaaataccttacaaactgcagatatatttaatttt
gaagaaacagtttatagtcatcatatgtctccagttgccaccaagcactgtttggtagca
gtcggtactagagggcccaaagtacaactttgtgacttaaagtctggatcctgttcccac
attttacagggtcacagacaagaaatattggcagtttcttggtcgccacgttgtgaatat
atcttggcaactgcaagtgctgacagcagagtaaaattatgggatgtcaggagagcatca
ggatgtttatttactcttgatcagcataatggaaaaaagtcacaagctgttgaatcagca
aacactgctcataatgggaaagttaatggcttatgttttacaagtgatgggcttcacctc
cttactgttggtacggataatcgaatgagactctggaatagttccaatggagaaaacaca
ctagtaaactatggaaaagtttgtaatgacagtagaaaagcattgaaattcactgtctcc
gatggctgcagttcagaatttgttttcgtgccatatggtagcaccattgctgtttataca
atttactcaggagaacagataactatgcttaagggacattataaaagtgttgactgctgt
gtatttcagtctcatttccaggaactttatagtggtagcagagactgcaatatacttgct
tgggttccatccttatatgaaccagttcctgataatgatgagcctacaaccaaatcacag
ttaaatccggcatttgaagatgcatggagcagcagtgatgaggaaggatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (31)   
   Pfam (31)   
All databases (37)   

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