KEGG   Leopardus geoffroyi (Geoffroy's cat): 123607991
Entry
123607991         CDS       T10761                                 
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
  KO
K14296  nuclear pore complex protein Nup153
Organism
lgf  Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03013  Nucleocytoplasmic transport
lgf03250  Viral life cycle - HIV-1
lgf05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:lgf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123607991 (NUP153)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    123607991 (NUP153)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    123607991 (NUP153)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgf03019]
    123607991 (NUP153)
Messenger RNA biogenesis [BR:lgf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     123607991 (NUP153)
SSDB
Motif
Pfam: Nup153 Zn_ribbon_RanBP Nup_retrotrp_bd HTH_IclR
Other DBs
NCBI-GeneID: 123607991
NCBI-ProteinID: XP_045353250
Position
B2:11598178..11685858
AA seq 1483 aa
MASGAGGIGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
KNEDVCSCSTDTREVPQWPENREDDHLIYADEESSNIHDGRITPEPTVSNTEEPSTTSTS
SNYPDVLTRPSLHRSHMNFSVLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDD
NISTTSGFSSRASDKDIAVTKNTSVPPLWSPEAERTHSLSQHTATSSKKPAFNLSAFGTL
SPSLGNSSILKTSQLGDSPFYPGKTMYGGAAAAARQLKLRNTPYQAPVRRQMKAKQLNAQ
SYGVTSSTARRILQTLEKMSSPLADAKRIPSVVSSPLNSPLDRSGIDTTSDFQAKRERVD
SQYPPVQRLMTPKPVSIATNRTVYFKPSLTPSGELRKTTQRIDKKHNTGYENPVTPGQNR
EQRESGFSYPNFSMSAANGLSSGVGSGGGKMRRERTRFVASKPPEEEEMEVPVLPKISLP
ITSSSLPTFNFSSSVITTSSPSPVSPSQSLTNKVQVASPNSPGSPMFRFSSPIVKSTEAD
VLPPSSIGFTFSVPVAKTTELSGSSSISEPITSSSLAQDTNAVNSTSCKKQPDEDCEGPF
RPAKTLKEGSVLDVLKSPGFTSPKADSLAAQPTTTSPVVYTRPAISSFSSGGVGFGESVK
SGSPGSSSSWQCDTCLLQNKATDGKCIACQATKLPAKDTAKQTGIGAPSKSDKSTLSTSG
TGFGDRFKPAVGTWDCDTCLVQNKPEAMKCVACETPKPGTGVKRVLTLPVAAASAVPVAA
APPTCTVTTGAVGFADKFKRPLGSWECPVCCVSNNGEDSKCVSCVSEKPGSSVPASSSST
IPASLSSGSCLGLDKFKKPEGSWDCEVCLVQNKADSTKCIACESAKPGTKSEFKGFGTSS
PSPNPAASSFKFGLPSSSSGPSQTLTSTGDFKFGEQGGFKIGVSSDSESPNSMSEGFKFS
KPIGDFKFGVSSESKPEEAKKDNKNDNGFKFGLSSGLSNTASLAPFQFGVSNLGQQEKKE
ELPKSSSTGFSFGAGVINPAPAAAVTGVTAENKSSFSFGAIGAKSVSVAPFTGKTSEANK
EDTPATKGGFTFGGTEPAPVPSASLFVLGRTEEKQQEPVTSTSLVFGKKADSEEPKCQPV
FSFGNSEQTKDESSAKATFSFSVAKPSEKESEQPTKAAFAFGSQTNTTTDPGAAKPMFSF
LNNNSSNSSAPATSAAGGIFGSSTASSGAPVAAFVFGQASNPVSSSAFGNSAEASTSQSL
LFSQESKPAATSSAGSAVTPFVFGPGAGGSNPVTSGFNFGATTTCSSAGSSFVFGTGPSA
PSASPAFGVNQTPTFGQSQGASQPNPSGFGALSSSAALFSAASQPTPPTFGTVSSSSQPP
VFGQQPSQSAFGSAAAPSSTSVFQFGSSTTNFNFTNNNPSGVFTFGANPSAPAAAAQPSG
SGGFPFSHPAGAFTVGSNGKNMFSSSGTSVSGRKIKTAVRRKK
NT seq 4452 nt   +upstreamnt  +downstreamnt
atggcctcgggagccggaggaataggagggggcggtggcggcaagatccggacgcggcgt
tgccaccaggggccaattaagccttaccagcaggggcgacaacagcaccagggcattctt
agcagggttacagaatctgttaagaatattgtgccaggatggctacaaagatacttcaac
aagaatgaagatgtgtgcagctgctcaacagacacaagagaggtaccacagtggccggaa
aatagagaagatgatcatctgatatatgccgatgaggagagctctaatattcatgatggg
agaatcactcccgagcccacagtcagtaatacagaagaaccctcaacaactagtacttct
tcaaattacccagatgtattaacaaggccttctcttcatcggagccatatgaatttctcc
gtgttggaatctcctgcactacactgtcagccctccacatcctcggcattcccaattggc
agttctggattttcccttgtaaaggaaattaaagattctacctctcaacatgatgatgat
aacatctcaactaccagtggtttttcttcaagagcttctgataaagatatagctgttaca
aagaacacttcagtgccacctctgtggtccccagaggctgaacgtactcattcactctca
cagcacactgccaccagctcaaaaaaaccagcattcaacttgtctgcctttggaacactt
tccccttcacttgggaattcttcaatccttaaaacaagtcagcttggagattctcctttt
tatcctggaaaaacaatgtacggtggggcagcagctgctgcaagacaactgaaactccga
aacacaccgtatcaggcaccagtcagaaggcagatgaaagctaagcagctgaatgcacag
tcctatggtgtgaccagttccacagctcggcggatattgcaaactttagagaagatgtca
agccctctcgcggatgcaaaaagaatcccgtctgttgtttcttctcccctgaattctcct
cttgataggagtggaatagatacgacctcagactttcaggccaaaagggaaagggtggat
tctcagtatccccccgttcagagactcatgaccccgaagccggtttccatagcaacaaat
agaactgtttattttaaaccgtctctgaccccatctggtgaattaaggaagactactcaa
agaatagataaaaagcacaatactggatatgagaaccctgtgacaccaggacaaaacaga
gaacaacgagaaagtggcttttcttacccaaatttcagtatgtctgcagccaatggttta
tcttctggagtaggtagtggaggcggcaagatgagacgagagagaacacgctttgttgca
tctaaacctccagaggaagaggaaatggaagtgccagtattgccgaaaatctctctaccc
atcaccagttcttcactgcctaccttcaattttagttcctctgtgatcacaacttcctct
ccatcacccgttagtccctcacaatcactgacaaacaaggtacaagtggcctctccaaac
agtcctggcagtcccatgtttcgattttcatctccaattgtaaaatctactgaggcagat
gttctacctccgtcatctattggatttacgtttagtgtgcctgttgcgaaaacaacagaa
ctttctggctctagtagtatttcagaaccaattacaagtagtagtttagctcaagatacc
aatgcagtgaacagtacaagctgtaagaagcagccagatgaagattgtgagggtcctttt
agacctgcaaaaaccctgaaagaaggaagtgtcctagatgttctcaaaagccctggtttc
acatcaccaaaggcagattctcttgctgctcagcctactaccacaagcccagtagtttat
acaagaccagcaataagtagtttttcttctgggggagttgggtttggagaaagtgtaaaa
tctgggtcacctggatcgtcgtcgtcgtggcagtgtgatacttgtctgctccagaacaaa
gctacagacggcaagtgcatagcctgtcaggcaacaaaattgccagcaaaagatactgct
aaacaaactggaattggagcaccaagcaaaagtgacaagtcaactctctctacatcaggg
acgggttttggagacagatttaaaccagcagtcgggacctgggattgtgacacctgttta
gtgcaaaacaaacccgaagcgatgaaatgcgtagcttgtgagacaccgaaacccggaact
ggtgtgaagcgagtccttacgctgccagtggctgcggcgagcgctgtgcccgtggccgcc
gcacctcccacctgcactgtgaccacgggcgccgtaggattcgcagataaatttaaaagg
cccctgggatcttgggagtgtccagtatgctgtgtttctaataatggagaagacagtaaa
tgtgtgtcctgtgtgtctgagaagccaggaagttcagtacctgcttcaagtagcagcacc
atccctgcctctctgtcttctggaagctgccttgggttagacaagttcaagaaaccagag
ggaagctgggactgtgaagtgtgcctagtgcaaaataaagccgactctaccaaatgcata
gcatgcgaaagtgcaaagccaggcacaaagtctgagttcaaaggctttggcacgtcttcc
ccgtctccgaacccagctgcctcatccttcaaatttggtctcccatcatcgtcttctggg
ccttctcagactttaacaagcactggagattttaaatttggagagcagggaggcttcaaa
ataggtgtgtcttcagattctgagtctccaaactccatgagtgaaggctttaaattttca
aaaccaataggagattttaagtttggagtttcgtccgagtccaagcctgaagaagctaaa
aaggacaacaagaacgataatggttttaagttcggactctcttcaggtttaagcaatacg
gcatcgttagctccgtttcagtttggggtgtctaatcttgggcagcaagagaagaaggag
gagctccctaaatcttcatctacaggctttagctttggtgcaggtgtcattaacccggca
cctgctgctgccgtcaccggggtgaccgctgagaacaagagcagcttcagctttggagcc
ataggagccaagagcgtttcggtggctccgttcacagggaagacgtcagaagcaaacaaa
gaagacacgccggccaccaagggagggttcacttttggtggcacggagcctgcccccgtg
ccgtctgcctctttgttcgttttgggaaggacagaagagaaacagcaagagccggtcact
tctacttctctggtgtttgggaagaaagcggacagtgaggagccgaagtgtcagccggtg
ttttcctttgggaattcagagcaaaccaaagatgagagttctgcaaaggccacctttagt
ttcagtgtggcaaaaccatctgagaaggaatcggaacagcctacgaaggccgcgttcgca
tttgggtctcaaaccaataccacgactgatccaggtgcagcaaaaccaatgttcagtttc
ttgaacaacaattcttctaattcaagtgcaccggccacttcggcagccgggggcatattc
ggtagctccactgcgtcctccggtgcgccggtggctgccttcgtatttggacaggccagc
aaccctgtgagcagctccgctttcgggaactctgcggaggccagtacttctcagtctctg
ctgttttctcaggagagcaaacctgcagccacgtccagcgcaggctcagcggtcaccccg
ttcgtcttcggtccaggggccggcggtagtaatcctgtaacctctggtttcaattttgga
gctaccaccacatgcagctctgcaggatcctccttcgtgtttggcactggaccttcagca
ccgtctgccagtccagcatttggtgttaaccaaaccccgacgtttggacagagtcaaggt
gccagccagccgaatccctcaggcttcggagccctgtcatcttccgcagcattgttttct
gccgcttctcagcccacgccacccacttttgggacagtgtcaagcagcagccagcctcct
gtgtttggacaacagcctagtcagtctgcatttggctctgcagcagctcctagttctact
tcagttttccagttcggcagcagcaccacgaacttcaacttcacgaacaacaacccgtcg
ggagtgttcacgttcggtgcgaaccccagcgctcctgcggccgcggcccagccctcgggc
tccgggggctttccgttcagccatcccgcgggggccttcaccgtggggtcaaacgggaaa
aatatgttctcgtcttctggaacttcagtctctgggcgcaagataaagactgccgtcagg
cgcaaaaaataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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