KEGG   Limnohabitans sp. TEGF004: LTEGF4_02200
Entry
LTEGF4_02200      CDS       T11140                                 
Name
(GenBank) Crp/Fnr family transcriptional regulator
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
limt  Limnohabitans sp. TEGF004
Pathway
limt02020  Two-component system
limt02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:limt00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LTEGF4_02200
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LTEGF4_02200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:limt03000]
    LTEGF4_02200
Transcription factors [BR:limt03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    LTEGF4_02200
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 HTH_24 MarR_2 GntR TrmB Crp MarR HTH_41 DUF7343 WHD_RecQ_mid_bact HTH_36 NirdL-like_HTH HTH_AsnC-type
Other DBs
NCBI-ProteinID: BDU54539
Position
complement(197735..198442)
AA seq 235 aa
MAQTPTVYQRRRSLTEQELKLIPWFGLLKENERNRIESQLVVSDPMPGDYVCRMGRQATY
WFGVVEGLLKMSTDSASGRTITFTGVPPGGWFGEGTAIKRETYRYNIMALRRSVVAGLPI
DTFHWLLDNSIGFNRFVMNQLNERLAQFIEAREIDRSSDPDVRVARNLAALFNPTLFPGV
GEILRITQQELAYLVGLSRQRVNVALNRLEEQGAIRIEYGGMRVLNLAALRASGT
NT seq 708 nt   +upstreamnt  +downstreamnt
atggcgcaaacacccaccgtttaccagcgacgacgctctctcacggagcaagagctcaag
ctcatcccgtggtttggcttgctcaaagaaaacgagcgcaaccgcatcgaatcgcagctg
gtggtgagcgaccccatgcctggtgactacgtgtgccgcatggggcgccaagccacgtat
tggtttggcgtggtggaaggtctgttgaagatgagcacggacagcgccagcgggcgcacc
atcaccttcacgggtgtgccgcccggtggttggtttggtgagggcacggccatcaagcgc
gagacctaccgctacaacatcatggcccttcgccgcagcgtggtggcggggctgccaatt
gacacgtttcattggttgctggacaactcgattgggttcaaccgctttgtgatgaaccaa
ctcaacgaacgcttagcgcaattcattgaggctcgcgagattgaccgctccagcgatcca
gatgtgcgcgtggcacgcaacttggcagcgctgttcaaccccactttgtttccgggcgtg
ggcgagattttgcgcatcacgcagcaagagctggcctacctggtgggcctgtcgcgccaa
cgtgtgaacgtggcactgaatcgattggaagaacaaggcgcgattcgcattgaatacggc
ggcatgcgcgtgctgaaccttgccgcgctgcgcgccagcggcacttag

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (14)   
   Pfam (14)   
All databases (15)   

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