KEGG   Limnohabitans sp. TEGF004: LTEGF4_23610
Entry
LTEGF4_23610      CDS       T11140                                 
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
limt  Limnohabitans sp. TEGF004
Pathway
limt03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:limt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LTEGF4_23610 (ung)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:limt03400]
    LTEGF4_23610 (ung)
Enzymes [BR:limt01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     LTEGF4_23610 (ung)
DNA repair and recombination proteins [BR:limt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LTEGF4_23610 (ung)
 Prokaryotic type
     LTEGF4_23610 (ung)
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: BDU56680
Position
complement(2440676..2441476)
AA seq 266 aa
MMGDLFGETLPAEVGAPHLTRWSPADWAVQSDWQPVLDAFWRSAQGMSLASFVQSRLDAG
AVVYPKHPLWALQLTPLSQVKVVILGQDPYHGPHQAQGLSFSVAPGVKIPPSLRNIFKEL
QRDLSQPAPTSGSLEAWAKRGVLLLNTSLTVEDGQPASHAKRGWEQLTDALLTEVACTAP
ACVYMLWGGHAQAKAELIERETCAQSTGFLGLRDGAPLKREALVLKANHPSPLSALRPPR
PFIGCGHFSQAKIWLAQKNLSLEWNL
NT seq 801 nt   +upstreamnt  +downstreamnt
atgatgggtgacttgtttggcgaaacgttgccggcagaggttggtgcgccgcatttgacc
cgttggtcgccagctgattgggctgtccagtctgattggcagcctgtgctcgatgcgttt
tggcgcagcgcacaaggcatgtcattggcaagttttgtgcaatcgcgcttagatgctggc
gcggtggtgtatcccaagcatcctttgtgggcgttgcagctgacgcctttgtcccaggtg
aaagtggtcatcttggggcaggacccttatcacgggccgcaccaagcgcaaggtttgtct
ttttcagtggcgcctggcgtcaagattccgccctcgttacgaaacattttcaaagagctt
caacgtgacttgagtcaacccgcgccaaccagtggctctttagaggcctgggccaagcgt
ggggttttgctactcaacaccagtttgacggtggaagatggccagcccgccagtcatgcc
aagcgcgggtgggagcagttgacggatgccttgttgaccgaggtggcgtgcaccgcgcct
gcgtgcgtgtacatgctctggggtggtcacgcccaagccaaggctgaattgattgagcgc
gaaacctgtgcccagtcgacaggttttctgggtttgcgtgatggcgcacctctcaaacgc
gaggctttggtgctcaaggctaaccatccctcgccgttgtcggccttgcgcccgccacgg
cccttcatcggttgcggtcatttttcgcaagccaagatttggttggcgcagaaaaacctg
agcttggaatggaatttgtga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (2)   

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