KEGG   Lactobacillus johnsonii DPC 6026: LJP_1286c
Entry
LJP_1286c         CDS       T01960                                 
Name
(GenBank) hypothetical protein
  KO
K06958  RNase adapter protein RapZ
Organism
ljh  Lactobacillus johnsonii DPC 6026
Brite
KEGG Orthology (KO) [BR:ljh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ljh03019]
    LJP_1286c
Messenger RNA biogenesis [BR:ljh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     LJP_1286c
SSDB
Motif
Pfam: RapZ-like_N PapZ_C AAA_22 AAA_18 Rad17 Myosin_head AAA_28 AAA_30 nSTAND6 SKI NPHP3_N AAA_16 Bac_DnaA_C
Other DBs
NCBI-ProteinID: AEB93608
Position
complement(1378375..1379250)
AA seq 291 aa
MAEQKKQLLIVTGMSGAGKTVAIKALEDMGYFVVDNLPPELLGSFWELINNSSDFSKAAV
VVDLRVKSFYKDLVDEIKSLEDSQNVQSTVLFLDASDDVLVSRYKETRRLPPLAHTGRLL
DGIQEERNILSRTKNISNIIIDTSHLSTKELKTKLVDKFGDNRTRTFSIEVMSFGFKYGI
PIDADIVMDVRFLPNPFYIPQLKPFTGLDRRVFDYVMSKKETKEFYAKFLDMLETAIPGY
IAEGKEKLTIAIGCTGGQHRSVSIARQLAVDLAKKYPVDISHREISRYIGQ
NT seq 876 nt   +upstreamnt  +downstreamnt
atggctgaacaaaagaaacaattattgattgttactggtatgagtggtgcaggtaaaact
gtggcaattaaagcattagaagatatgggatatttcgtggtagataatttaccaccagaa
ttattgggaagtttctgggaattaattaataattcttcggattttagtaaggcagcagta
gttgttgacttgagagtaaagagtttttataaagatttggttgatgaaatcaagtcttta
gaggatagtcaaaatgttcagtcaacagttttgtttttagatgcttcagatgatgtctta
gtgtctcggtataaagaaacaagacgtttgcctcctttggctcatacaggtagattgctt
gatggaattcaagaagaaagaaatattttatcaagaaccaagaatatttcaaacataatt
attgatacctcccatttatctaccaaggaattaaagacaaaattagtagataagtttgga
gataatcgaactcggacgttttcaattgaggtaatgagttttggatttaaatatggtatt
ccaattgatgcagatattgtaatggatgtaagatttttgccaaatccattctacattccc
caacttaagccatttactggtttagatcgtcgagtttttgattatgtaatgagcaagaaa
gaaactaaagagttttatgctaagtttttagatatgttggagacggctattccaggatat
attgctgaaggaaaagaaaaattgactattgcaattgggtgtacaggtggtcagcacaga
agcgtttcaattgcacgccaattagcagttgatttagctaaaaaatatcctgttgatatt
tctcaccgagagattagtcgttatattggacaataa

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